Entry information : HaROXY05HanXRQChr01g0001531
Entry ID 14441
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY05HanXRQChr01g0001531
Name HaROXY05HanXRQChr01g0001531
Class ROXY Grx    [Orthogroup: ROXY002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY05
start..stop
S start..stop
HaROXY07 193 2e-66 1..102 1..102
HaROXY06 193 2e-66 1..102 1..102
HaROXY34 174 7e-59 1..102 1..102
HaROXY26 159 3e-52 1..102 24..125
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4804442..4804750 309  
join(4804442..4804750)


exon

Literature and cross-references HaROXY05HanXRQChr01g0001531
DNA ref. HanXRQ genome:   HanXRQChr01 (4804442..4804750)
Protein sequence: HaROXY05HanXRQChr01g0001531
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   102
PWM (Da):   %s   11049.77  
PI (pH):   %s   7.46
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAMVTSLVSE RPVVIFSKSS CCMCHTIKTL IINFVANPTV YELDEHPNGK QLEKELRGLG CKPSVPAVFI GEELIGGANE IMSHHLKGQL VPLLLKANAI WV 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTATGG TTACATCATT GGTGAGCGAA AGGCCTGTTG TTATATTCAG CAAAAGCTCT TGCTGCATGT GCCACACCAT TAAGACACTG ATTATTAATT TTGTTGCAAA TCCTACAGTT  TATGAGTTAG ATGAACACCC AAACGGGAAA CAGTTAGAGA AGGAATTAAG AGGACTAGGA TGCAAGCCAA GTGTGCCAGC TGTATTCATA GGAGAGGAAC TGATTGGTGG TGCTAATGAA 
ATAATGAGCC ACCATCTTAA GGGACAACTG GTACCGTTGC TCCTCAAGGC TAATGCTATA TGGGTTTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTATGG TTACATCATT GGTGAGCGAA AGGCCTGTTG TTATATTCAG CAAAAGCTCT TGCTGCATGT GCCACACCAT TAAGACACTG ATTATTAATT TTGTTGCAAA TCCTACAGTT  TATGAGTTAG ATGAACACCC AAACGGGAAA CAGTTAGAGA AGGAATTAAG AGGACTAGGA TGCAAGCCAA GTGTGCCAGC TGTATTCATA GGAGAGGAAC TGATTGGTGG TGCTAATGAA 
ATAATGAGCC ACCATCTTAA GGGACAACTG GTACCGTTGC TCCTCAAGGC TAATGCTATA TGGGTTTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTATGG TTACATCATT GGTGAGCGAA AGGCCTGTTG TTATATTCAG CAAAAGCTCT TGCTGCATGT GCCACACCAT TAAGACACTG ATTATTAATT TTGTTGCAAA TCCTACAGTT  TATGAGTTAG ATGAACACCC AAACGGGAAA CAGTTAGAGA AGGAATTAAG AGGACTAGGA TGCAAGCCAA GTGTGCCAGC TGTATTCATA GGAGAGGAAC TGATTGGTGG TGCTAATGAA 
ATAATGAGCC ACCATCTTAA GGGACAACTG GTACCGTTGC TCCTCAAGGC TAATGCTATA TGGGTTTAG 

Retrieve as FASTA