Entry information : HaROXY08HanXRQChr03g0082101
Entry ID 14444
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY08HanXRQChr03g0082101
Name HaROXY08HanXRQChr03g0082101
Class ROXY Grx    [Orthogroup: ROXY006]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY08
start..stop
S start..stop
HaROXY38 159 1e-51 4..130 9..133
HaROXY17 154 1e-49 4..130 9..136
ThasROXY03 123 2e-37 1..130 4..137
AtROXY21 117 3e-35 12..130 17..142
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 133234292..133234699 408  
join(133234292..133234699)


exon

Literature and cross-references HaROXY08HanXRQChr03g0082101
DNA ref. HanXRQ genome:   HanXRQChr03 (133234292..133234699)
Protein sequence: HaROXY08HanXRQChr03g0082101
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   135
PWM (Da):   %s   14269.21  
PI (pH):   %s   4.15
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQGLRSDAEF TLQLSPTTAS PLAINISEST HTTIQRLITE SPVVIFSRSD CYMCDVMKRL FYSIGVYPTV IELEEDEIAD LAAFNCHGGG GDDVAPVVFI GGSFVGGLES LVAIHLSGCL 
VSRLVEIGVL QGVVL 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGGCC TCCGCTCTGA CGCCGAGTTC ACCCTACAAC TATCTCCCAC CACCGCTTCC CCACTCGCAA TCAACATATC CGAGTCAACT CACACGACGA TCCAACGACT CATAACCGAA  AGCCCAGTTG TGATATTCAG CCGCTCAGAC TGCTACATGT GTGATGTCAT GAAACGTCTC TTTTATTCCA TCGGTGTTTA CCCCACTGTT ATTGAACTGG AGGAGGATGA GATCGCTGAT  CTTGCTGCCT TTAACTGTCA TGGTGGCGGT GGAGATGACG TGGCTCCGGT GGTGTTCATT GGTGGGAGTT TTGTTGGTGG GTTGGAGAGC CTTGTGGCAA TTCATTTGAG TGGTTGTCTT 
GTTTCGAGGC TTGTGGAAAT TGGAGTTCTT CAGGGTGTTG TGTTGTAA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGGCC TCCGCTCTGA CGCCGAGTTC ACCCTACAAC TATCTCCCAC CACCGCTTCC CCACTCGCAA TCAACATATC CGAGTCAACT CACACGACGA TCCAACGACT CATAACCGAA  AGCCCAGTTG TGATATTCAG CCGCTCAGAC TGCTACATGT GTGATGTCAT GAAACGTCTC TTTTATTCCA TCGGTGTTTA CCCCACTGTT ATTGAACTGG AGGAGGATGA GATCGCTGAT  CTTGCTGCCT TTAACTGTCA TGGTGGCGGT GGAGATGACG TGGCTCCGGT GGTGTTCATT GGTGGGAGTT TTGTTGGTGG GTTGGAGAGC CTTGTGGCAA TTCATTTGAG TGGTTGTCTT 
GTTTCGAGGC TTGTGGAAAT TGGAGTTCTT CAGGGTGTTG TGTTGTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGGCC TCCGCTCTGA CGCCGAGTTC ACCCTACAAC TATCTCCCAC CACCGCTTCC CCACTCGCAA TCAACATATC CGAGTCAACT CACACGACGA TCCAACGACT CATAACCGAA  AGCCCAGTTG TGATATTCAG CCGCTCAGAC TGCTACATGT GTGATGTCAT GAAACGTCTC TTTTATTCCA TCGGTGTTTA CCCCACTGTT ATTGAACTGG AGGAGGATGA GATCGCTGAT  CTTGCTGCCT TTAACTGTCA TGGTGGCGGT GGAGATGACG TGGCTCCGGT GGTGTTCATT GGTGGGAGTT TTGTTGGTGG GTTGGAGAGC CTTGTGGCAA TTCATTTGAG TGGTTGTCTT 
GTTTCGAGGC TTGTGGAAAT TGGAGTTCTT CAGGGTGTTG TGTTGTAA 

Retrieve as FASTA