Entry information : HaROXY10HanXRQChr04g0109591
Entry ID 14446
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY10HanXRQChr04g0109591
Name HaROXY10HanXRQChr04g0109591
Class ROXY Grx    [Orthogroup: ROXY004]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY10
start..stop
S start..stop
HaROXY30 164 8e-55 1..99 1..99
HaROXY12 164 8e-55 1..99 1..99
HaROXY29 162 5e-54 1..99 1..99
HaROXY32 148 1e-48 1..99 1..99
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 89773130..89773429 300  
join(89773130..89773429)


exon

Literature and cross-references HaROXY10HanXRQChr04g0109591
DNA ref. HanXRQ genome:   HanXRQChr04 (89773130..89773429)
Protein sequence: HaROXY10HanXRQChr04g0109591
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   99
PWM (Da):   %s   10766.61  
PI (pH):   %s   8.5
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDRVNVLASK SALVIFTKST CFMCHSIKAL FFDFGASPAV YEVDSNVELE CALRRLGSNI AFPAVFVGSK YLGSTKEVIS QHIDGTLKQK LIEAKAIWL 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATCGGG TGAATGTTCT AGCTTCCAAG AGTGCTTTGG TTATCTTCAC AAAAAGCACA TGCTTCATGT GCCATAGTAT CAAGGCTCTC TTCTTTGATT TTGGTGCAAG TCCCGCAGTT  TATGAGGTTG ACAGTAATGT CGAACTAGAG TGTGCCCTAC GGAGGTTGGG TTCTAATATT GCGTTTCCAG CCGTGTTTGT AGGTAGTAAA TATCTGGGTT CTACTAAAGA AGTTATTTCC 
CAACATATTG ACGGCACTTT AAAGCAAAAG CTTATTGAAG CAAAGGCTAT CTGGCTCTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATCGGG TGAATGTTCT AGCTTCCAAG AGTGCTTTGG TTATCTTCAC AAAAAGCACA TGCTTCATGT GCCATAGTAT CAAGGCTCTC TTCTTTGATT TTGGTGCAAG TCCCGCAGTT  TATGAGGTTG ACAGTAATGT CGAACTAGAG TGTGCCCTAC GGAGGTTGGG TTCTAATATT GCGTTTCCAG CCGTGTTTGT AGGTAGTAAA TATCTGGGTT CTACTAAAGA AGTTATTTCC 
CAACATATTG ACGGCACTTT AAAGCAAAAG CTTATTGAAG CAAAGGCTAT CTGGCTCTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATCGGG TGAATGTTCT AGCTTCCAAG AGTGCTTTGG TTATCTTCAC AAAAAGCACA TGCTTCATGT GCCATAGTAT CAAGGCTCTC TTCTTTGATT TTGGTGCAAG TCCCGCAGTT  TATGAGGTTG ACAGTAATGT CGAACTAGAG TGTGCCCTAC GGAGGTTGGG TTCTAATATT GCGTTTCCAG CCGTGTTTGT AGGTAGTAAA TATCTGGGTT CTACTAAAGA AGTTATTTCC 
CAACATATTG ACGGCACTTT AAAGCAAAAG CTTATTGAAG CAAAGGCTAT CTGGCTCTAG 

Retrieve as FASTA