Entry information : HaROXY12HanXRQChr04g0110171
Entry ID 14448
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY12HanXRQChr04g0110171
Name HaROXY12HanXRQChr04g0110171
Class ROXY Grx    [Orthogroup: ROXY006]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY12
start..stop
S start..stop
HaROXY10 164 8e-55 1..99 1..99
HaROXY30 157 6e-52 1..99 1..99
HaROXY29 155 1e-51 1..99 1..99
HaROXY32 139 3e-45 1..98 1..98
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 92420116..92420415 300  
join(92420116..92420415)


exon

Literature and cross-references HaROXY12HanXRQChr04g0110171
DNA ref. HanXRQ genome:   HanXRQChr04 (92420116..92420415)
Protein sequence: HaROXY12HanXRQChr04g0110171
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   99
PWM (Da):   %s   10926.6  
PI (pH):   %s   6.23
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDRVNDLAFK SVAVIFTKST CFMCHSIKAL FYDFGASHAV YEVDHDVDLE CALWSLGSNI AFPAVFVGGK YLGSTKEVIS LQIDDILKRK LIEAKAIWL 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAGGG TGAATGATTT AGCTTTCAAG AGTGTTGCCG TTATCTTCAC CAAAAGCACA TGCTTTATGT GCCATAGTAT CAAGGCTCTC TTCTATGATT TTGGTGCAAG TCATGCAGTT  TATGAAGTTG ACCATGATGT CGATCTAGAG TGTGCCCTAT GGAGTTTGGG TTCTAATATT GCGTTTCCAG CCGTGTTTGT AGGTGGTAAA TATCTGGGTT CTACTAAAGA AGTTATTTCC 
TTACAGATTG ATGACATTTT AAAGCGAAAG CTGATTGAAG CAAAGGCTAT CTGGCTCTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAGGG TGAATGATTT AGCTTTCAAG AGTGTTGCCG TTATCTTCAC CAAAAGCACA TGCTTTATGT GCCATAGTAT CAAGGCTCTC TTCTATGATT TTGGTGCAAG TCATGCAGTT  TATGAAGTTG ACCATGATGT CGATCTAGAG TGTGCCCTAT GGAGTTTGGG TTCTAATATT GCGTTTCCAG CCGTGTTTGT AGGTGGTAAA TATCTGGGTT CTACTAAAGA AGTTATTTCC 
TTACAGATTG ATGACATTTT AAAGCGAAAG CTGATTGAAG CAAAGGCTAT CTGGCTCTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAGGG TGAATGATTT AGCTTTCAAG AGTGTTGCCG TTATCTTCAC CAAAAGCACA TGCTTTATGT GCCATAGTAT CAAGGCTCTC TTCTATGATT TTGGTGCAAG TCATGCAGTT  TATGAAGTTG ACCATGATGT CGATCTAGAG TGTGCCCTAT GGAGTTTGGG TTCTAATATT GCGTTTCCAG CCGTGTTTGT AGGTGGTAAA TATCTGGGTT CTACTAAAGA AGTTATTTCC 
TTACAGATTG ATGACATTTT AAAGCGAAAG CTGATTGAAG CAAAGGCTAT CTGGCTCTAG 

Retrieve as FASTA