Entry information : HaROXY16HanXRQChr05g0128931
Entry ID 14452
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY16HanXRQChr05g0128931
Name HaROXY16HanXRQChr05g0128931
Class ROXY Grx    [Orthogroup: ROXY001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY16
start..stop
S start..stop
HaROXY18 238 3e-83 1..136 1..132
HaROXY39 176 2e-58 19..136 7..124
MpalROXY01 148 2e-47 30..136 25..130
MpROXY01 148 2e-47 30..136 25..130
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 419037..419447 411  
complement(join(419037..419447))


exon

Literature and cross-references HaROXY16HanXRQChr05g0128931
DNA ref. HanXRQ genome:   HanXRQChr05 (419447..419037)
Protein sequence: HaROXY16HanXRQChr05g0128931
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   136
PWM (Da):   %s   14859.34  
PI (pH):   %s   7.66
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQYHGSTTMQ YYYNHMPVSY HHHHHPTVAV DPLERVAKLA SQSAVVIFSL SSCCMCYAVK SLFSGMGVNP TVYELDEDPV RGREMERALV RLMGSSTAVP VVFIGGKLVG SMDRVMASHI 
NGTLVPLLKE AGALWL 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAATATC ATGGAAGTAC CACAATGCAA TATTACTACA ACCACATGCC GGTGAGTTAC CACCACCACC ACCACCCGAC GGTGGCGGTG GATCCGCTAG AGAGGGTGGC AAAGCTGGCG  TCACAAAGTG CGGTGGTGAT ATTCAGTTTG AGCAGTTGTT GTATGTGTTA TGCGGTCAAG AGTTTGTTTT CCGGGATGGG TGTTAACCCG ACGGTGTACG AGCTAGATGA GGATCCGGTC  AGGGGTAGGG AGATGGAACG GGCGTTGGTC AGGCTTATGG GCAGCTCTAC GGCGGTGCCG GTGGTGTTTA TCGGTGGGAA GTTGGTGGGG TCTATGGACC GGGTTATGGC GTCTCATATT 
AATGGGACTT TGGTCCCACT TCTTAAGGAA GCTGGGGCAC TATGGCTTTA G 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAATATC ATGGAAGTAC CACAATGCAA TATTACTACA ACCACATGCC GGTGAGTTAC CACCACCACC ACCACCCGAC GGTGGCGGTG GATCCGCTAG AGAGGGTGGC AAAGCTGGCG  TCACAAAGTG CGGTGGTGAT ATTCAGTTTG AGCAGTTGTT GTATGTGTTA TGCGGTCAAG AGTTTGTTTT CCGGGATGGG TGTTAACCCG ACGGTGTACG AGCTAGATGA GGATCCGGTC  AGGGGTAGGG AGATGGAACG GGCGTTGGTC AGGCTTATGG GCAGCTCTAC GGCGGTGCCG GTGGTGTTTA TCGGTGGGAA GTTGGTGGGG TCTATGGACC GGGTTATGGC GTCTCATATT 
AATGGGACTT TGGTCCCACT TCTTAAGGAA GCTGGGGCAC TATGGCTTTA G 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAATATC ATGGAAGTAC CACAATGCAA TATTACTACA ACCACATGCC GGTGAGTTAC CACCACCACC ACCACCCGAC GGTGGCGGTG GATCCGCTAG AGAGGGTGGC AAAGCTGGCG  TCACAAAGTG CGGTGGTGAT ATTCAGTTTG AGCAGTTGTT GTATGTGTTA TGCGGTCAAG AGTTTGTTTT CCGGGATGGG TGTTAACCCG ACGGTGTACG AGCTAGATGA GGATCCGGTC  AGGGGTAGGG AGATGGAACG GGCGTTGGTC AGGCTTATGG GCAGCTCTAC GGCGGTGCCG GTGGTGTTTA TCGGTGGGAA GTTGGTGGGG TCTATGGACC GGGTTATGGC GTCTCATATT 
AATGGGACTT TGGTCCCACT TCTTAAGGAA GCTGGGGCAC TATGGCTTTA G 

Retrieve as FASTA