Entry information : HaROXY17HanXRQChr06g0173921
Entry ID 14453
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY17HanXRQChr06g0173921
Name HaROXY17HanXRQChr06g0173921
Class ROXY Grx    [Orthogroup: ROXY005]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY17
start..stop
S start..stop
HaROXY38 213 3e-73 1..138 1..135
HaROXY08 154 1e-49 9..136 4..130
AtROXY21 147 9e-47 11..136 11..142
ThasROXY03 144 1e-45 8..136 8..137
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 29306957..29307373 417  
join(29306957..29307373)


exon

Literature and cross-references HaROXY17HanXRQChr06g0173921
DNA ref. HanXRQ genome:   HanXRQChr06 (29306957..29307373)
Protein sequence: HaROXY17HanXRQChr06g0173921
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   138
PWM (Da):   %s   14559.54  
PI (pH):   %s   6.06
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHGAHTHRLR SSGGVRLELT PTTTSPLSID TSESTEMRIQ RLITENPVII FSRSSCCMCH VMKRLLSSLG VHPTVIELEE DEIHALSVSL PDGGAEAETV APAVFIGGAR VGGLETLVGL 
HLSGHLVPML VEVGVLVL 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCACGGCG CCCACACCCA CCGTCTCCGA TCCTCCGGCG GCGTCCGCCT CGAACTCACC CCCACAACCA CCTCTCCTCT TTCCATCGAC ACCTCCGAAT CCACCGAAAT GAGGATCCAG  CGACTCATAA CTGAAAATCC GGTAATAATA TTCAGCCGGT CGTCTTGCTG CATGTGCCAC GTCATGAAAC GTCTGCTTTC GTCACTCGGT GTCCACCCCA CCGTCATCGA GCTGGAGGAG  GACGAGATCC ACGCGCTCTC CGTGTCGCTC CCCGACGGCG GAGCAGAGGC GGAGACCGTT GCTCCGGCGG TGTTTATTGG TGGTGCGCGT GTTGGTGGCT TGGAAACCCT CGTCGGACTT 
CACTTGAGTG GCCACCTTGT TCCAATGCTT GTGGAAGTTG GTGTTTTGGT CTTGTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCACGGCG CCCACACCCA CCGTCTCCGA TCCTCCGGCG GCGTCCGCCT CGAACTCACC CCCACAACCA CCTCTCCTCT TTCCATCGAC ACCTCCGAAT CCACCGAAAT GAGGATCCAG  CGACTCATAA CTGAAAATCC GGTAATAATA TTCAGCCGGT CGTCTTGCTG CATGTGCCAC GTCATGAAAC GTCTGCTTTC GTCACTCGGT GTCCACCCCA CCGTCATCGA GCTGGAGGAG  GACGAGATCC ACGCGCTCTC CGTGTCGCTC CCCGACGGCG GAGCAGAGGC GGAGACCGTT GCTCCGGCGG TGTTTATTGG TGGTGCGCGT GTTGGTGGCT TGGAAACCCT CGTCGGACTT 
CACTTGAGTG GCCACCTTGT TCCAATGCTT GTGGAAGTTG GTGTTTTGGT CTTGTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCACGGCG CCCACACCCA CCGTCTCCGA TCCTCCGGCG GCGTCCGCCT CGAACTCACC CCCACAACCA CCTCTCCTCT TTCCATCGAC ACCTCCGAAT CCACCGAAAT GAGGATCCAG  CGACTCATAA CTGAAAATCC GGTAATAATA TTCAGCCGGT CGTCTTGCTG CATGTGCCAC GTCATGAAAC GTCTGCTTTC GTCACTCGGT GTCCACCCCA CCGTCATCGA GCTGGAGGAG  GACGAGATCC ACGCGCTCTC CGTGTCGCTC CCCGACGGCG GAGCAGAGGC GGAGACCGTT GCTCCGGCGG TGTTTATTGG TGGTGCGCGT GTTGGTGGCT TGGAAACCCT CGTCGGACTT 
CACTTGAGTG GCCACCTTGT TCCAATGCTT GTGGAAGTTG GTGTTTTGGT CTTGTAA 

Retrieve as FASTA