Entry information : HaROXY18HanXRQChr06g0175271
Entry ID 14454
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY18HanXRQChr06g0175271
Name HaROXY18HanXRQChr06g0175271
Class ROXY Grx    [Orthogroup: ROXY001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY18
start..stop
S start..stop
HaROXY16 238 3e-83 1..132 1..136
HaROXY39 179 5e-60 1..132 1..124
AtROXY02 147 3e-47 1..132 1..140
MpROXY01 146 7e-47 26..132 25..130
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 33852392..33852790 399  
complement(join(33852392..33852790))


exon

Literature and cross-references HaROXY18HanXRQChr06g0175271
DNA ref. HanXRQ genome:   HanXRQChr06 (33852790..33852392)
Protein sequence: HaROXY18HanXRQChr06g0175271
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   132
PWM (Da):   %s   14432.32 Transmb domain:   %s   i42-64o84-106i
PI (pH):   %s   8.04
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQYQAATEYY YNYIPVSHQY FPTVAVDPLE RVAKLAAQNA VMIFSLSTCC MCYAVKSLFS GMGVNPTVYE LDEDPLRGRE IERALVRLMG SSTAVPVVFI GGRLVGSMDR VMASHINGTL 
VPLLKKAGAL WL 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAATATC AAGCAGCCAC TGAATACTAC TACAACTACA TACCGGTAAG CCACCAGTAC TTCCCCACGG TAGCAGTTGA TCCACTAGAG AGGGTGGCCA AACTTGCGGC CCAAAACGCG  GTGATGATAT TTAGTTTGAG CACGTGTTGC ATGTGCTATG CCGTCAAGAG TCTCTTTTCT GGCATGGGTG TCAACCCGAC TGTGTACGAA CTCGACGAGG ATCCCCTCAG AGGAAGAGAG  ATCGAGAGGG CTTTGGTTAG ACTTATGGGC AGCTCTACGG CGGTGCCGGT GGTGTTTATC GGTGGGAGAT TGGTGGGGTC GATGGATAGA GTGATGGCTT CACATATCAA TGGAACTTTG 
GTTCCACTTC TTAAGAAGGC TGGAGCCCTT TGGCTTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAATATC AAGCAGCCAC TGAATACTAC TACAACTACA TACCGGTAAG CCACCAGTAC TTCCCCACGG TAGCAGTTGA TCCACTAGAG AGGGTGGCCA AACTTGCGGC CCAAAACGCG  GTGATGATAT TTAGTTTGAG CACGTGTTGC ATGTGCTATG CCGTCAAGAG TCTCTTTTCT GGCATGGGTG TCAACCCGAC TGTGTACGAA CTCGACGAGG ATCCCCTCAG AGGAAGAGAG  ATCGAGAGGG CTTTGGTTAG ACTTATGGGC AGCTCTACGG CGGTGCCGGT GGTGTTTATC GGTGGGAGAT TGGTGGGGTC GATGGATAGA GTGATGGCTT CACATATCAA TGGAACTTTG 
GTTCCACTTC TTAAGAAGGC TGGAGCCCTT TGGCTTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAATATC AAGCAGCCAC TGAATACTAC TACAACTACA TACCGGTAAG CCACCAGTAC TTCCCCACGG TAGCAGTTGA TCCACTAGAG AGGGTGGCCA AACTTGCGGC CCAAAACGCG  GTGATGATAT TTAGTTTGAG CACGTGTTGC ATGTGCTATG CCGTCAAGAG TCTCTTTTCT GGCATGGGTG TCAACCCGAC TGTGTACGAA CTCGACGAGG ATCCCCTCAG AGGAAGAGAG  ATCGAGAGGG CTTTGGTTAG ACTTATGGGC AGCTCTACGG CGGTGCCGGT GGTGTTTATC GGTGGGAGAT TGGTGGGGTC GATGGATAGA GTGATGGCTT CACATATCAA TGGAACTTTG 
GTTCCACTTC TTAAGAAGGC TGGAGCCCTT TGGCTTTAA 

Retrieve as FASTA