Entry information : HaROXY19HanXRQChr07g0193911
Entry ID 14455
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY19HanXRQChr07g0193911
Name HaROXY19HanXRQChr07g0193911
Class ROXY Grx    [Orthogroup: ROXY008]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY19
start..stop
S start..stop
HaROXY20 156 1e-51 1..101 1..101
HaROXY23 155 2e-51 1..101 1..101
HaROXY22 154 5e-51 1..101 1..101
AtROXY13 138 2e-44 1..101 1..102
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 55427151..55427456 306  
complement(join(55427151..55427456))


exon

Literature and cross-references HaROXY19HanXRQChr07g0193911
DNA ref. HanXRQ genome:   HanXRQChr07 (55427456..55427151)
Protein sequence: HaROXY19HanXRQChr07g0193911
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   101 (302)
PWM (Da):   %s   10983.8 (33562.0)  
PI (pH):   %s   8.5 (6.17) Peptide Signal:   %s   cut: 25 range:12-313
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDRVNIMVSE RPVVIFSKSS CILSYSNKSL FTNFGVNPTI YELDEIVRGG EIEQALSVRG HSKVPIVFIG GELVGGANEI MSLHLKRNLK PMLISAGALW V 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGAG TGAACATAAT GGTTTCTGAG AGGCCTGTGG TGATCTTCAG TAAGAGTTCC TGCATCTTGT CCTACTCAAA CAAGTCTCTC TTCACTAACT TTGGTGTGAA CCCTACGATC  TATGAGCTCG ATGAGATTGT AAGAGGCGGA GAGATTGAGC AAGCATTGTC TGTGCGCGGT CATAGTAAGG TCCCCATTGT CTTCATTGGT GGTGAGTTGG TTGGTGGAGC TAATGAGATT 
ATGAGTCTTC ATCTGAAGAG GAATCTGAAG CCAATGTTGA TCAGCGCTGG AGCTTTATGG GTTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGAG TGAACATAAT GGTTTCTGAG AGGCCTGTGG TGATCTTCAG TAAGAGTTCC TGCATCTTGT CCTACTCAAA CAAGTCTCTC TTCACTAACT TTGGTGTGAA CCCTACGATC  TATGAGCTCG ATGAGATTGT AAGAGGCGGA GAGATTGAGC AAGCATTGTC TGTGCGCGGT CATAGTAAGG TCCCCATTGT CTTCATTGGT GGTGAGTTGG TTGGTGGAGC TAATGAGATT 
ATGAGTCTTC ATCTGAAGAG GAATCTGAAG CCAATGTTGA TCAGCGCTGG AGCTTTATGG GTTTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGAG TGAACATAAT GGTTTCTGAG AGGCCTGTGG TGATCTTCAG TAAGAGTTCC TGCATCTTGT CCTACTCAAA CAAGTCTCTC TTCACTAACT TTGGTGTGAA CCCTACGATC  TATGAGCTCG ATGAGATTGT AAGAGGCGGA GAGATTGAGC AAGCATTGTC TGTGCGCGGT CATAGTAAGG TCCCCATTGT CTTCATTGGT GGTGAGTTGG TTGGTGGAGC TAATGAGATT 
ATGAGTCTTC ATCTGAAGAG GAATCTGAAG CCAATGTTGA TCAGCGCTGG AGCTTTATGG GTTTGA 

Retrieve as FASTA