Entry information : HaROXY20HanXRQChr07g0193921
Entry ID 14456
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY20HanXRQChr07g0193921
Name HaROXY20HanXRQChr07g0193921
Class ROXY Grx    [Orthogroup: ROXY003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY20
start..stop
S start..stop
HaROXY22 187 7e-64 1..101 1..101
HaROXY23 164 6e-55 1..101 1..101
HaROXY19 156 1e-51 1..101 1..101
AtROXY13 139 1e-44 1..101 1..102
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 55578027..55578332 306  
complement(join(55578027..55578332))


exon

Literature and cross-references HaROXY20HanXRQChr07g0193921
DNA ref. HanXRQ genome:   HanXRQChr07 (55578332..55578027)
Protein sequence: HaROXY20HanXRQChr07g0193921
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   101 (302)
PWM (Da):   %s   10916.74 (33562.0)  
PI (pH):   %s   7.51 (6.17) Peptide Signal:   %s   cut: 30 range:30-331
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDRVKIMVSE RPVVIFSKSS CILSHTVKSL FNDLGGNPTI YELDEIPRGH EIEQALYGHG CSALPIVFIG GELVGGTSEI MSLQLKRGLK PMLVRAGALW V 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGAG TGAAAATTAT GGTTTCTGAG AGGCCTGTGG TCATCTTTAG TAAAAGTTCT TGCATCTTGT CCCACACCGT GAAGTCCCTC TTCAATGACT TGGGTGGGAA CCCTACTATC  TATGAGCTTG ATGAGATACC AAGAGGCCAT GAAATTGAGC AGGCACTATA CGGGCATGGG TGCAGTGCTC TGCCCATTGT CTTCATTGGT GGCGAGCTAG TTGGTGGAAC TAGTGAGATA 
ATGAGTCTTC AACTCAAGAG GGGTTTGAAA CCAATGCTCG TCAGGGCTGG AGCTTTGTGG GTTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGAG TGAAAATTAT GGTTTCTGAG AGGCCTGTGG TCATCTTTAG TAAAAGTTCT TGCATCTTGT CCCACACCGT GAAGTCCCTC TTCAATGACT TGGGTGGGAA CCCTACTATC  TATGAGCTTG ATGAGATACC AAGAGGCCAT GAAATTGAGC AGGCACTATA CGGGCATGGG TGCAGTGCTC TGCCCATTGT CTTCATTGGT GGCGAGCTAG TTGGTGGAAC TAGTGAGATA 
ATGAGTCTTC AACTCAAGAG GGGTTTGAAA CCAATGCTCG TCAGGGCTGG AGCTTTGTGG GTTTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGAG TGAAAATTAT GGTTTCTGAG AGGCCTGTGG TCATCTTTAG TAAAAGTTCT TGCATCTTGT CCCACACCGT GAAGTCCCTC TTCAATGACT TGGGTGGGAA CCCTACTATC  TATGAGCTTG ATGAGATACC AAGAGGCCAT GAAATTGAGC AGGCACTATA CGGGCATGGG TGCAGTGCTC TGCCCATTGT CTTCATTGGT GGCGAGCTAG TTGGTGGAAC TAGTGAGATA 
ATGAGTCTTC AACTCAAGAG GGGTTTGAAA CCAATGCTCG TCAGGGCTGG AGCTTTGTGG GTTTGA 

Retrieve as FASTA