Entry information : HaROXY21HanXRQChr07g0193941
Entry ID 14457
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY21HanXRQChr07g0193941
Name HaROXY21HanXRQChr07g0193941
Class ROXY Grx    [Orthogroup: ROXY013]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY21
start..stop
S start..stop
AtROXY10 152 5e-50 1..102 1..102
ThasROXY04 150 2e-49 1..102 1..102
AtROXY13 140 2e-45 1..102 1..102
ThasROXY09 139 5e-45 1..102 1..102
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 55873190..55873498 309  
join(55873190..55873498)


exon

Literature and cross-references HaROXY21HanXRQChr07g0193941
DNA ref. HanXRQ genome:   HanXRQChr07 (55873190..55873498)
Protein sequence: HaROXY21HanXRQChr07g0193941
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   102 (302)
PWM (Da):   %s   11099.78 (33562.0)  
PI (pH):   %s   7.51 (6.17) Peptide Signal:   %s   cut: 25 range:12-313
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDTVTRLVSS RPVVIFSRSS CSMCHTIKSL LLEFGVNPAV YELDEMTKGP EIEQALLRHG RNPIVPAVFI GGEYVGGANE IISLHLQRSL QPMLKNAGAL WV 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACACAG TGACAAGATT GGTGTCATCT AGACCGGTTG TGATATTCAG TAGAAGTTCG TGTTCTATGT GTCACACAAT AAAGTCACTA CTTTTGGAAT TTGGAGTAAA CCCAGCCGTC  TATGAGCTAG ATGAGATGAC CAAAGGACCG GAAATCGAGC AAGCCCTTTT GAGGCATGGG CGAAATCCAA TCGTCCCTGC GGTGTTTATA GGAGGTGAAT ATGTTGGTGG AGCCAATGAG 
ATAATTAGCC TTCACCTTCA ACGGTCACTA CAACCTATGC TCAAAAATGC TGGAGCTCTA TGGGTGTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACACAG TGACAAGATT GGTGTCATCT AGACCGGTTG TGATATTCAG TAGAAGTTCG TGTTCTATGT GTCACACAAT AAAGTCACTA CTTTTGGAAT TTGGAGTAAA CCCAGCCGTC  TATGAGCTAG ATGAGATGAC CAAAGGACCG GAAATCGAGC AAGCCCTTTT GAGGCATGGG CGAAATCCAA TCGTCCCTGC GGTGTTTATA GGAGGTGAAT ATGTTGGTGG AGCCAATGAG 
ATAATTAGCC TTCACCTTCA ACGGTCACTA CAACCTATGC TCAAAAATGC TGGAGCTCTA TGGGTGTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACACAG TGACAAGATT GGTGTCATCT AGACCGGTTG TGATATTCAG TAGAAGTTCG TGTTCTATGT GTCACACAAT AAAGTCACTA CTTTTGGAAT TTGGAGTAAA CCCAGCCGTC  TATGAGCTAG ATGAGATGAC CAAAGGACCG GAAATCGAGC AAGCCCTTTT GAGGCATGGG CGAAATCCAA TCGTCCCTGC GGTGTTTATA GGAGGTGAAT ATGTTGGTGG AGCCAATGAG 
ATAATTAGCC TTCACCTTCA ACGGTCACTA CAACCTATGC TCAAAAATGC TGGAGCTCTA TGGGTGTGA 

Retrieve as FASTA