Entry information : HaROXY22HanXRQChr07g0193951
Entry ID 14458
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY22HanXRQChr07g0193951
Name HaROXY22HanXRQChr07g0193951
Class ROXY Grx    [Orthogroup: ROXY003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY22
start..stop
S start..stop
HaROXY20 187 7e-64 1..101 1..101
HaROXY23 173 3e-58 1..101 1..101
HaROXY19 154 5e-51 1..101 1..101
AtROXY13 143 1e-46 1..101 1..102
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 55878378..55878683 306  
join(55878378..55878683)


exon

Literature and cross-references HaROXY22HanXRQChr07g0193951
DNA ref. HanXRQ genome:   HanXRQChr07 (55878378..55878683)
Protein sequence: HaROXY22HanXRQChr07g0193951
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   101 (302)
PWM (Da):   %s   10997.84 (33562.0)  
PI (pH):   %s   7.41 (6.17) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDRVKIMVFE RPVVIFSKSS CVLSHTVKSL FNDLGVNPTI YELDEISRGH EIEQALYGLG CSTLPTVFIG GELVGGTNEI MSLQLKRGLK PVLIRAGALW V 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGAG TGAAAATAAT GGTGTTTGAG AGGCCTGTGG TCATCTTCAG TAAAAGTTCT TGCGTCTTGT CCCACACGGT GAAGTCGCTC TTCAATGACT TGGGTGTGAA CCCCACAATC  TACGAGCTTG ATGAGATATC AAGAGGCCAT GAAATCGAGC AAGCACTTTA TGGGCTTGGG TGCAGTACTC TTCCAACGGT CTTCATTGGT GGAGAGCTAG TTGGTGGAAC TAATGAGATA 
ATGAGTCTTC AACTCAAAAG GGGTTTGAAG CCGGTGCTCA TCAGGGCTGG AGCTTTGTGG GTTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGAG TGAAAATAAT GGTGTTTGAG AGGCCTGTGG TCATCTTCAG TAAAAGTTCT TGCGTCTTGT CCCACACGGT GAAGTCGCTC TTCAATGACT TGGGTGTGAA CCCCACAATC  TACGAGCTTG ATGAGATATC AAGAGGCCAT GAAATCGAGC AAGCACTTTA TGGGCTTGGG TGCAGTACTC TTCCAACGGT CTTCATTGGT GGAGAGCTAG TTGGTGGAAC TAATGAGATA 
ATGAGTCTTC AACTCAAAAG GGGTTTGAAG CCGGTGCTCA TCAGGGCTGG AGCTTTGTGG GTTTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGAG TGAAAATAAT GGTGTTTGAG AGGCCTGTGG TCATCTTCAG TAAAAGTTCT TGCGTCTTGT CCCACACGGT GAAGTCGCTC TTCAATGACT TGGGTGTGAA CCCCACAATC  TACGAGCTTG ATGAGATATC AAGAGGCCAT GAAATCGAGC AAGCACTTTA TGGGCTTGGG TGCAGTACTC TTCCAACGGT CTTCATTGGT GGAGAGCTAG TTGGTGGAAC TAATGAGATA 
ATGAGTCTTC AACTCAAAAG GGGTTTGAAG CCGGTGCTCA TCAGGGCTGG AGCTTTGTGG GTTTGA 

Retrieve as FASTA