Entry information : HaROXY23HanXRQChr08g0227611
Entry ID 14459
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY23HanXRQChr08g0227611
Name HaROXY23HanXRQChr08g0227611
Class ROXY Grx    [Orthogroup: ROXY008]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY23
start..stop
S start..stop
HaROXY22 173 3e-58 1..101 1..101
HaROXY20 164 6e-55 1..101 1..101
HaROXY19 155 2e-51 1..101 1..101
ThasROXY04 148 1e-48 1..101 1..102
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 90174325..90174630 306  
complement(join(90174325..90174630))


exon

Literature and cross-references HaROXY23HanXRQChr08g0227611
DNA ref. HanXRQ genome:   HanXRQChr08 (90174630..90174325)
Protein sequence: HaROXY23HanXRQChr08g0227611
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   101 (302)
PWM (Da):   %s   10853.69 (33562.0)  
PI (pH):   %s   7.42 (6.17) Peptide Signal:   %s   cut: 25 range:12-313
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDRVKRMVAE RPVVIFSKSS CILSHTIKSL FNDYGVHPTV YELDEIARGR DIEQALSGLG CSTVPAVFIG GELVGGANEI MSLQLKSVLK PMLINAGALW V 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACCGAG TGAAGAGAAT GGTGGCTGAG AGGCCAGTGG TGATCTTTAG CAAGAGTTCT TGCATCTTGT CCCACACAAT CAAGTCTTTG TTCAATGACT ATGGGGTTCA CCCGACAGTC  TATGAGCTTG ATGAGATAGC AAGGGGCCGA GATATAGAGC AGGCATTGTC TGGGCTCGGG TGCAGCACGG TCCCAGCTGT GTTCATTGGT GGTGAGTTGG TTGGTGGAGC TAATGAAATT 
ATGAGTCTTC AACTCAAGAG TGTTTTGAAG CCGATGCTCA TCAATGCTGG AGCTTTATGG GTTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACCGAG TGAAGAGAAT GGTGGCTGAG AGGCCAGTGG TGATCTTTAG CAAGAGTTCT TGCATCTTGT CCCACACAAT CAAGTCTTTG TTCAATGACT ATGGGGTTCA CCCGACAGTC  TATGAGCTTG ATGAGATAGC AAGGGGCCGA GATATAGAGC AGGCATTGTC TGGGCTCGGG TGCAGCACGG TCCCAGCTGT GTTCATTGGT GGTGAGTTGG TTGGTGGAGC TAATGAAATT 
ATGAGTCTTC AACTCAAGAG TGTTTTGAAG CCGATGCTCA TCAATGCTGG AGCTTTATGG GTTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACCGAG TGAAGAGAAT GGTGGCTGAG AGGCCAGTGG TGATCTTTAG CAAGAGTTCT TGCATCTTGT CCCACACAAT CAAGTCTTTG TTCAATGACT ATGGGGTTCA CCCGACAGTC  TATGAGCTTG ATGAGATAGC AAGGGGCCGA GATATAGAGC AGGCATTGTC TGGGCTCGGG TGCAGCACGG TCCCAGCTGT GTTCATTGGT GGTGAGTTGG TTGGTGGAGC TAATGAAATT 
ATGAGTCTTC AACTCAAGAG TGTTTTGAAG CCGATGCTCA TCAATGCTGG AGCTTTATGG GTTTAA 

Retrieve as FASTA