Entry information : HaROXY24HanXRQChr10g0283871
Entry ID 14460
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY24HanXRQChr10g0283871
Name HaROXY24HanXRQChr10g0283871
Class ROXY Grx    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY24
start..stop
S start..stop
HaROXY33 197 9e-68 1..102 1..102
HaROXY03 159 5e-53 1..102 1..101
HaROXY02 157 3e-52 1..102 1..101
HaROXY04 156 1e-51 1..102 1..101
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 32737682..32737990 309  
complement(join(32737682..32737990))


exon

Literature and cross-references HaROXY24HanXRQChr10g0283871
DNA ref. HanXRQ genome:   HanXRQChr10 (32737990..32737682)
Protein sequence: HaROXY24HanXRQChr10g0283871
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   102 (302)
PWM (Da):   %s   10983.64 (33562.0)  
PI (pH):   %s   4.66 (6.17) Peptide Signal:   %s   cut: 27 range:39-340
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDKIQTLTSE NGIVVFSKST CCLCYAVTIL FQELGVEPLV HELDHDPNGW EIEKALVNLG CNSPPVPAVF IGGNLVGSTN EVMSLHLRGA LIPLLRPYQT LA 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAAGA TACAAACATT GACATCAGAG AACGGAATTG TCGTTTTTAG CAAGAGCACG TGTTGCTTAT GCTACGCTGT GACCATTTTG TTCCAAGAAC TTGGGGTCGA GCCGTTGGTA  CATGAGCTGG ATCATGATCC GAATGGTTGG GAGATTGAGA AGGCCCTTGT GAACCTGGGC TGCAACTCCC CCCCTGTGCC AGCAGTGTTC ATAGGGGGTA ACCTTGTGGG GTCTACCAAC 
GAGGTGATGT CACTCCACCT CCGTGGTGCT CTCATTCCGC TCCTCAGGCC ATATCAGACA CTCGCGTAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAAGA TACAAACATT GACATCAGAG AACGGAATTG TCGTTTTTAG CAAGAGCACG TGTTGCTTAT GCTACGCTGT GACCATTTTG TTCCAAGAAC TTGGGGTCGA GCCGTTGGTA  CATGAGCTGG ATCATGATCC GAATGGTTGG GAGATTGAGA AGGCCCTTGT GAACCTGGGC TGCAACTCCC CCCCTGTGCC AGCAGTGTTC ATAGGGGGTA ACCTTGTGGG GTCTACCAAC 
GAGGTGATGT CACTCCACCT CCGTGGTGCT CTCATTCCGC TCCTCAGGCC ATATCAGACA CTCGCGTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAAGA TACAAACATT GACATCAGAG AACGGAATTG TCGTTTTTAG CAAGAGCACG TGTTGCTTAT GCTACGCTGT GACCATTTTG TTCCAAGAAC TTGGGGTCGA GCCGTTGGTA  CATGAGCTGG ATCATGATCC GAATGGTTGG GAGATTGAGA AGGCCCTTGT GAACCTGGGC TGCAACTCCC CCCCTGTGCC AGCAGTGTTC ATAGGGGGTA ACCTTGTGGG GTCTACCAAC 
GAGGTGATGT CACTCCACCT CCGTGGTGCT CTCATTCCGC TCCTCAGGCC ATATCAGACA CTCGCGTAG 

Retrieve as FASTA