Entry information : HaROXY28HanXRQChr11g0350131
Entry ID 14464
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY28HanXRQChr11g0350131
Name HaROXY28HanXRQChr11g0350131
Class ROXY Grx    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY28
start..stop
S start..stop
HaROXY07 142 3e-46 1..94 1..94
HaROXY06 142 3e-46 1..94 1..94
HaROXY05 140 3e-45 1..94 1..94
HaROXY26 135 3e-43 1..94 24..117
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 156106810..156107100 291  
complement(join(156106810..156107100))


exon

Literature and cross-references HaROXY28HanXRQChr11g0350131
DNA ref. HanXRQ genome:   HanXRQChr11 (156107100..156106810)
Protein sequence: HaROXY28HanXRQChr11g0350131
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   96 (302)
PWM (Da):   %s   10417.5 (33562.0)  
PI (pH):   %s   8.49 (6.17) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MTTVTRAVAE KPVVIFSKSS CCMSHTIKAL IYSFGINPTV YELDEYTNGK QLEQELKALG CKPSVPVVFI GQDLIGGPNE IMQLHLKRKL ATLLGR 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTACGG TTACAAGGGC GGTTGCAGAA AAGCCAGTGG TGATATTCAG CAAAAGCTCT TGCTGTATGT CCCACACCAT TAAAGCTCTA ATTTATAGCT TCGGGATAAA CCCTACGGTT  TATGAGCTAG ATGAATATAC TAACGGGAAG CAACTGGAAC AAGAGCTGAA AGCACTAGGA TGTAAGCCAA GTGTACCAGT TGTGTTTATT GGTCAAGATC TAATAGGTGG GCCGAATGAG 
ATCATGCAGC TCCATCTTAA GAGAAAATTA GCCACGCTAC TGGGAAGGTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTACGG TTACAAGGGC GGTTGCAGAA AAGCCAGTGG TGATATTCAG CAAAAGCTCT TGCTGTATGT CCCACACCAT TAAAGCTCTA ATTTATAGCT TCGGGATAAA CCCTACGGTT  TATGAGCTAG ATGAATATAC TAACGGGAAG CAACTGGAAC AAGAGCTGAA AGCACTAGGA TGTAAGCCAA GTGTACCAGT TGTGTTTATT GGTCAAGATC TAATAGGTGG GCCGAATGAG 
ATCATGCAGC TCCATCTTAA GAGAAAATTA GCCACGCTAC TGGGAAGGTA A 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTACGG TTACAAGGGC GGTTGCAGAA AAGCCAGTGG TGATATTCAG CAAAAGCTCT TGCTGTATGT CCCACACCAT TAAAGCTCTA ATTTATAGCT TCGGGATAAA CCCTACGGTT  TATGAGCTAG ATGAATATAC TAACGGGAAG CAACTGGAAC AAGAGCTGAA AGCACTAGGA TGTAAGCCAA GTGTACCAGT TGTGTTTATT GGTCAAGATC TAATAGGTGG GCCGAATGAG 
ATCATGCAGC TCCATCTTAA GAGAAAATTA GCCACGCTAC TGGGAAGGTA A 

Retrieve as FASTA