Entry information : HaROXY29HanXRQChr11g0350141
Entry ID 14465
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY29HanXRQChr11g0350141
Name HaROXY29HanXRQChr11g0350141
Class ROXY Grx    [Orthogroup: ROXY006]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY29
start..stop
S start..stop
HaROXY30 191 2e-65 1..99 1..99
HaROXY32 184 9e-63 1..99 1..99
HaROXY25 179 1e-60 1..99 1..99
HaROXY10 162 5e-54 1..99 1..99
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 156161259..156161558 300  
join(156161259..156161558)


exon

Literature and cross-references HaROXY29HanXRQChr11g0350141
DNA ref. HanXRQ genome:   HanXRQChr11 (156161259..156161558)
Protein sequence: HaROXY29HanXRQChr11g0350141
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   99
PWM (Da):   %s   10709.46  
PI (pH):   %s   8.33
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDRVKDLASK SAAVIFTKST CCMCHSIKAL FYDLGASPAV YEVDHDPDME RALRRLGCNP AFPAVFVGGK YVGSAKDVIS LHVDGTLKQK LIEARAIWL 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAGAG TGAAGGATTT GGCTTCCAAG AGTGCTGCGG TTATCTTTAC CAAAAGCACA TGTTGTATGT GCCATAGTAT TAAGGCTCTA TTCTATGATC TTGGTGCAAG TCCTGCAGTT  TATGAAGTTG ACCATGATCC CGATATGGAG CGGGCCCTAC GTCGGTTAGG CTGTAATCCT GCGTTTCCAG CAGTGTTTGT AGGTGGTAAA TATGTGGGGT CTGCTAAAGA TGTAATTTCC 
CTTCATGTTG ATGGCACTTT GAAACAAAAG CTGATTGAAG CAAGGGCTAT CTGGTTGTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAGAG TGAAGGATTT GGCTTCCAAG AGTGCTGCGG TTATCTTTAC CAAAAGCACA TGTTGTATGT GCCATAGTAT TAAGGCTCTA TTCTATGATC TTGGTGCAAG TCCTGCAGTT  TATGAAGTTG ACCATGATCC CGATATGGAG CGGGCCCTAC GTCGGTTAGG CTGTAATCCT GCGTTTCCAG CAGTGTTTGT AGGTGGTAAA TATGTGGGGT CTGCTAAAGA TGTAATTTCC 
CTTCATGTTG ATGGCACTTT GAAACAAAAG CTGATTGAAG CAAGGGCTAT CTGGTTGTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAGAG TGAAGGATTT GGCTTCCAAG AGTGCTGCGG TTATCTTTAC CAAAAGCACA TGTTGTATGT GCCATAGTAT TAAGGCTCTA TTCTATGATC TTGGTGCAAG TCCTGCAGTT  TATGAAGTTG ACCATGATCC CGATATGGAG CGGGCCCTAC GTCGGTTAGG CTGTAATCCT GCGTTTCCAG CAGTGTTTGT AGGTGGTAAA TATGTGGGGT CTGCTAAAGA TGTAATTTCC 
CTTCATGTTG ATGGCACTTT GAAACAAAAG CTGATTGAAG CAAGGGCTAT CTGGTTGTAG 

Retrieve as FASTA