Entry information : HaROXY30HanXRQChr11g0350151
Entry ID 14466
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY30HanXRQChr11g0350151
Name HaROXY30HanXRQChr11g0350151
Class ROXY Grx    [Orthogroup: ROXY006]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY30
start..stop
S start..stop
HaROXY29 191 2e-65 1..99 1..99
HaROXY32 184 1e-62 1..99 1..99
HaROXY25 177 6e-60 1..99 1..99
HaROXY10 164 7e-55 1..99 1..99
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 156168186..156168485 300  
join(156168186..156168485)


exon

Literature and cross-references HaROXY30HanXRQChr11g0350151
DNA ref. HanXRQ genome:   HanXRQChr11 (156168186..156168485)
Protein sequence: HaROXY30HanXRQChr11g0350151
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   99
PWM (Da):   %s   10711.49  
PI (pH):   %s   8.07
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDRVKDLASK SAAVIFTKST CCMCHSIKAL FYDLGASPAV YEVDHDVDME WALRRLGSNP AFPAVFIGGK YIGSAKDVIS LHVDGSLKQK LIEAKAIWF 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAGGG TGAAGGATTT AGCATCGAAG AGTGCTGCGG TTATCTTTAC CAAAAGCACA TGTTGTATGT GCCATAGTAT CAAGGCTCTG TTCTATGATC TTGGTGCAAG TCCTGCAGTT  TATGAAGTTG ACCATGATGT CGATATGGAG TGGGCCCTAC GTCGGTTGGG TTCTAATCCT GCGTTTCCAG CAGTGTTTAT AGGGGGCAAG TATATTGGTT CTGCTAAAGA TGTAATTTCC 
CTTCATGTTG ATGGCAGTTT GAAGCAAAAG CTGATTGAAG CAAAGGCTAT CTGGTTCTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAGGG TGAAGGATTT AGCATCGAAG AGTGCTGCGG TTATCTTTAC CAAAAGCACA TGTTGTATGT GCCATAGTAT CAAGGCTCTG TTCTATGATC TTGGTGCAAG TCCTGCAGTT  TATGAAGTTG ACCATGATGT CGATATGGAG TGGGCCCTAC GTCGGTTGGG TTCTAATCCT GCGTTTCCAG CAGTGTTTAT AGGGGGCAAG TATATTGGTT CTGCTAAAGA TGTAATTTCC 
CTTCATGTTG ATGGCAGTTT GAAGCAAAAG CTGATTGAAG CAAAGGCTAT CTGGTTCTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAGGG TGAAGGATTT AGCATCGAAG AGTGCTGCGG TTATCTTTAC CAAAAGCACA TGTTGTATGT GCCATAGTAT CAAGGCTCTG TTCTATGATC TTGGTGCAAG TCCTGCAGTT  TATGAAGTTG ACCATGATGT CGATATGGAG TGGGCCCTAC GTCGGTTGGG TTCTAATCCT GCGTTTCCAG CAGTGTTTAT AGGGGGCAAG TATATTGGTT CTGCTAAAGA TGTAATTTCC 
CTTCATGTTG ATGGCAGTTT GAAGCAAAAG CTGATTGAAG CAAAGGCTAT CTGGTTCTAG 

Retrieve as FASTA