Entry information : HaROXY33HanXRQChr15g0465881
Entry ID 14469
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY33HanXRQChr15g0465881
Name HaROXY33HanXRQChr15g0465881
Class ROXY Grx    [Orthogroup: ROXY001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY33
start..stop
S start..stop
HaROXY24 197 9e-68 1..102 1..102
HaROXY03 158 2e-52 1..102 1..101
HaROXY27 155 2e-51 1..102 1..100
HaROXY02 155 2e-51 1..102 1..101
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7931243..7931551 309  
join(7931243..7931551)


exon

Literature and cross-references HaROXY33HanXRQChr15g0465881
DNA ref. HanXRQ genome:   HanXRQChr15 (7931243..7931551)
Protein sequence: HaROXY33HanXRQChr15g0465881
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   102 (302)
PWM (Da):   %s   11042.7 (33562.0)  
PI (pH):   %s   4.76 (6.17) Peptide Signal:   %s   cut: 27 range:27-328
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDKIETLTSE NAIVVFSKST CCLCYAVTIL FKELGVEPLI HELDHDPEGW EIEKALVNQG CNSPPVPAVF IGGKLVGSTN EVMSLHLRGA LIPLIRPYQS LA 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAAGA TAGAAACACT AACATCAGAG AATGCAATTG TGGTTTTTAG CAAGAGCACA TGTTGCTTAT GTTATGCTGT TACTATTTTG TTCAAAGAAC TTGGGGTTGA GCCACTGATT  CATGAGCTGG ACCATGATCC AGAAGGCTGG GAGATTGAGA AGGCACTTGT GAACCAGGGT TGCAACTCCC CCCCTGTGCC AGCTGTGTTC ATAGGGGGTA AACTTGTTGG GTCCACTAAT 
GAGGTGATGT CACTCCACCT TAGGGGTGCC CTCATTCCAC TCATCAGGCC ATACCAGTCA TTGGCTTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAAGA TAGAAACACT AACATCAGAG AATGCAATTG TGGTTTTTAG CAAGAGCACA TGTTGCTTAT GTTATGCTGT TACTATTTTG TTCAAAGAAC TTGGGGTTGA GCCACTGATT  CATGAGCTGG ACCATGATCC AGAAGGCTGG GAGATTGAGA AGGCACTTGT GAACCAGGGT TGCAACTCCC CCCCTGTGCC AGCTGTGTTC ATAGGGGGTA AACTTGTTGG GTCCACTAAT 
GAGGTGATGT CACTCCACCT TAGGGGTGCC CTCATTCCAC TCATCAGGCC ATACCAGTCA TTGGCTTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAAGA TAGAAACACT AACATCAGAG AATGCAATTG TGGTTTTTAG CAAGAGCACA TGTTGCTTAT GTTATGCTGT TACTATTTTG TTCAAAGAAC TTGGGGTTGA GCCACTGATT  CATGAGCTGG ACCATGATCC AGAAGGCTGG GAGATTGAGA AGGCACTTGT GAACCAGGGT TGCAACTCCC CCCCTGTGCC AGCTGTGTTC ATAGGGGGTA AACTTGTTGG GTCCACTAAT 
GAGGTGATGT CACTCCACCT TAGGGGTGCC CTCATTCCAC TCATCAGGCC ATACCAGTCA TTGGCTTAG 

Retrieve as FASTA