Entry information : HaROXY34HanXRQChr15g0465981
Entry ID 14470
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY34HanXRQChr15g0465981
Name HaROXY34HanXRQChr15g0465981
Class ROXY Grx    [Orthogroup: ROXY002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY34
start..stop
S start..stop
HaROXY07 178 2e-60 1..102 1..102
HaROXY06 178 2e-60 1..102 1..102
HaROXY05 174 7e-59 1..102 1..102
HaROXY26 159 1e-52 1..102 24..125
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 8370111..8370419 309  
join(8370111..8370419)


exon

Literature and cross-references HaROXY34HanXRQChr15g0465981
DNA ref. HanXRQ genome:   HanXRQChr15 (8370111..8370419)
Protein sequence: HaROXY34HanXRQChr15g0465981
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   102
PWM (Da):   %s   11133.75  
PI (pH):   %s   8.33
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAMVRALVNE RSVVIFSKNS CCMCYTIKTL IRSFGANPTV YELDENPKGQ QIEMELKGLG CKPSVPAVFI GQELIGGANE IMTLHMKGQL VPLLLRANAI WV 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTATGG TTAGAGCTTT GGTTAATGAA AGATCAGTGG TAATATTCAG CAAAAACTCT TGCTGCATGT GTTACACAAT TAAGACATTA ATAAGAAGTT TTGGAGCTAA TCCTACTGTT  TATGAGCTTG ATGAGAATCC AAAGGGACAA CAAATAGAGA TGGAACTCAA GGGATTAGGG TGTAAGCCAA GTGTCCCAGC TGTGTTCATA GGGCAGGAGC TTATTGGTGG GGCCAATGAG 
ATAATGACAC TTCATATGAA GGGTCAGCTG GTGCCATTGC TACTCAGGGC TAATGCTATA TGGGTTTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTATGG TTAGAGCTTT GGTTAATGAA AGATCAGTGG TAATATTCAG CAAAAACTCT TGCTGCATGT GTTACACAAT TAAGACATTA ATAAGAAGTT TTGGAGCTAA TCCTACTGTT  TATGAGCTTG ATGAGAATCC AAAGGGACAA CAAATAGAGA TGGAACTCAA GGGATTAGGG TGTAAGCCAA GTGTCCCAGC TGTGTTCATA GGGCAGGAGC TTATTGGTGG GGCCAATGAG 
ATAATGACAC TTCATATGAA GGGTCAGCTG GTGCCATTGC TACTCAGGGC TAATGCTATA TGGGTTTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTATGG TTAGAGCTTT GGTTAATGAA AGATCAGTGG TAATATTCAG CAAAAACTCT TGCTGCATGT GTTACACAAT TAAGACATTA ATAAGAAGTT TTGGAGCTAA TCCTACTGTT  TATGAGCTTG ATGAGAATCC AAAGGGACAA CAAATAGAGA TGGAACTCAA GGGATTAGGG TGTAAGCCAA GTGTCCCAGC TGTGTTCATA GGGCAGGAGC TTATTGGTGG GGCCAATGAG 
ATAATGACAC TTCATATGAA GGGTCAGCTG GTGCCATTGC TACTCAGGGC TAATGCTATA TGGGTTTAG 

Retrieve as FASTA