Entry information : HaROXY36HanXRQChr15g0472281
Entry ID 14472
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY36HanXRQChr15g0472281
Name HaROXY36HanXRQChr15g0472281
Class ROXY Grx    [Orthogroup: ROXY007]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY36
start..stop
S start..stop
HaROXY35 251 3e-88 1..129 19..147
HaROXY14 194 9e-66 23..129 28..134
HaROXY13 144 2e-46 28..129 1..102
HaROXY07 136 2e-43 28..129 1..102
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 29849843..29850232 390  
complement(join(29849843..29850232))


exon

Literature and cross-references HaROXY36HanXRQChr15g0472281
DNA ref. HanXRQ genome:   HanXRQChr15 (29850232..29849843)
Protein sequence: HaROXY36HanXRQChr15g0472281
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   129
PWM (Da):   %s   14197.67  
PI (pH):   %s   8.34
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGIKLYTFQP LFIHCETPKA LIIIHIKMTT VASLLSENPV VIFSKTTCCI SHSIVELIRK FGANPMIYEL DELPSGSRIE RELIEFGCNP SVPAVFIGKK LIGGANELIS LNLQSKLRPL 
LINANAIWM 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGATCA AACTATACAC ATTCCAACCT TTGTTCATTC ATTGTGAAAC TCCGAAAGCC TTAATCATCA TACATATAAA GATGACCACG GTGGCAAGTC TGTTATCTGA GAATCCAGTT  GTGATATTCA GCAAAACGAC ATGTTGTATA AGCCACTCGA TCGTAGAACT CATAAGAAAA TTCGGGGCTA ACCCTATGAT ATATGAGCTT GATGAGCTTC CTAGTGGGAG TAGAATAGAG  AGAGAGTTAA TAGAGTTTGG ATGCAACCCT AGTGTGCCTG CTGTGTTCAT AGGGAAGAAG CTCATTGGTG GTGCTAATGA GCTGATCAGC CTTAATTTGC AAAGCAAGCT TAGACCACTA 
CTCATCAATG CTAATGCTAT ATGGATGTAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGATCA AACTATACAC ATTCCAACCT TTGTTCATTC ATTGTGAAAC TCCGAAAGCC TTAATCATCA TACATATAAA GATGACCACG GTGGCAAGTC TGTTATCTGA GAATCCAGTT  GTGATATTCA GCAAAACGAC ATGTTGTATA AGCCACTCGA TCGTAGAACT CATAAGAAAA TTCGGGGCTA ACCCTATGAT ATATGAGCTT GATGAGCTTC CTAGTGGGAG TAGAATAGAG  AGAGAGTTAA TAGAGTTTGG ATGCAACCCT AGTGTGCCTG CTGTGTTCAT AGGGAAGAAG CTCATTGGTG GTGCTAATGA GCTGATCAGC CTTAATTTGC AAAGCAAGCT TAGACCACTA 
CTCATCAATG CTAATGCTAT ATGGATGTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGATCA AACTATACAC ATTCCAACCT TTGTTCATTC ATTGTGAAAC TCCGAAAGCC TTAATCATCA TACATATAAA GATGACCACG GTGGCAAGTC TGTTATCTGA GAATCCAGTT  GTGATATTCA GCAAAACGAC ATGTTGTATA AGCCACTCGA TCGTAGAACT CATAAGAAAA TTCGGGGCTA ACCCTATGAT ATATGAGCTT GATGAGCTTC CTAGTGGGAG TAGAATAGAG  AGAGAGTTAA TAGAGTTTGG ATGCAACCCT AGTGTGCCTG CTGTGTTCAT AGGGAAGAAG CTCATTGGTG GTGCTAATGA GCTGATCAGC CTTAATTTGC AAAGCAAGCT TAGACCACTA 
CTCATCAATG CTAATGCTAT ATGGATGTAG 

Retrieve as FASTA