Entry information : HaROXY38HanXRQChr17g0538511
Entry ID 14474
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY38HanXRQChr17g0538511
Name HaROXY38HanXRQChr17g0538511
Class ROXY Grx    [Orthogroup: ROXY006]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY38
start..stop
S start..stop
HaROXY17 213 3e-73 1..135 1..138
HaROXY08 159 1e-51 9..133 4..130
ThasROXY11 145 2e-46 1..133 1..135
AtROXY21 143 2e-45 16..133 16..142
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 17543472..17543879 408  
join(17543472..17543879)


exon

Literature and cross-references HaROXY38HanXRQChr17g0538511
DNA ref. HanXRQ genome:   HanXRQChr17 (17543472..17543879)
Protein sequence: HaROXY38HanXRQChr17g0538511
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   135
PWM (Da):   %s   14328.48  
PI (pH):   %s   5.53
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQDLHRYPLR PTAGFRLELT PTTTSPLAID VSESTEMRIQ RLITENPVII FSRSGCCMCH VMKRLLSSLG VHPTVIELEE GEIDALSASQ QDGGETVAPA VFIGGARVGG LEGLVGLHLS 
GHLVPKLVEV GVLPL 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGACC TCCACCGCTA CCCTCTCCGT CCCACCGCCG GTTTCCGCCT TGAACTCACC CCGACAACCA CTTCCCCACT CGCCATCGAC GTCTCCGAAT CCACAGAAAT GAGGATCCAA  CGCCTCATAA CCGAGAATCC GGTAATAATA TTCAGCCGAT CAGGTTGCTG CATGTGCCAC GTAATGAAAC GACTCCTGTC ATCACTCGGT GTCCACCCTA CCGTCATCGA GCTGGAGGAG  GGTGAGATCG ACGCGCTCTC CGCGTCTCAA CAAGACGGCG GAGAGACGGT GGCTCCCGCG GTGTTCATCG GTGGAGCGCG TGTTGGTGGA TTAGAGGGTC TTGTTGGACT TCACTTGAGT 
GGTCACCTTG TTCCAAAGCT TGTGGAAGTT GGTGTTCTGC CGTTGTAA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGACC TCCACCGCTA CCCTCTCCGT CCCACCGCCG GTTTCCGCCT TGAACTCACC CCGACAACCA CTTCCCCACT CGCCATCGAC GTCTCCGAAT CCACAGAAAT GAGGATCCAA  CGCCTCATAA CCGAGAATCC GGTAATAATA TTCAGCCGAT CAGGTTGCTG CATGTGCCAC GTAATGAAAC GACTCCTGTC ATCACTCGGT GTCCACCCTA CCGTCATCGA GCTGGAGGAG  GGTGAGATCG ACGCGCTCTC CGCGTCTCAA CAAGACGGCG GAGAGACGGT GGCTCCCGCG GTGTTCATCG GTGGAGCGCG TGTTGGTGGA TTAGAGGGTC TTGTTGGACT TCACTTGAGT 
GGTCACCTTG TTCCAAAGCT TGTGGAAGTT GGTGTTCTGC CGTTGTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGACC TCCACCGCTA CCCTCTCCGT CCCACCGCCG GTTTCCGCCT TGAACTCACC CCGACAACCA CTTCCCCACT CGCCATCGAC GTCTCCGAAT CCACAGAAAT GAGGATCCAA  CGCCTCATAA CCGAGAATCC GGTAATAATA TTCAGCCGAT CAGGTTGCTG CATGTGCCAC GTAATGAAAC GACTCCTGTC ATCACTCGGT GTCCACCCTA CCGTCATCGA GCTGGAGGAG  GGTGAGATCG ACGCGCTCTC CGCGTCTCAA CAAGACGGCG GAGAGACGGT GGCTCCCGCG GTGTTCATCG GTGGAGCGCG TGTTGGTGGA TTAGAGGGTC TTGTTGGACT TCACTTGAGT 
GGTCACCTTG TTCCAAAGCT TGTGGAAGTT GGTGTTCTGC CGTTGTAA 

Retrieve as FASTA