Entry information : HaROXY39HanXRQChr17g0551631
Entry ID 14475
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY39HanXRQChr17g0551631
Name HaROXY39HanXRQChr17g0551631
Class ROXY Grx    [Orthogroup: ROXY002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY39
start..stop
S start..stop
HaROXY18 179 5e-60 1..124 1..132
HaROXY16 176 1e-58 7..124 19..136
MpROXY01 160 1e-52 1..124 1..130
MpalROXY01 160 2e-52 1..124 1..130
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 72475786..72476160 375  
join(72475786..72476160)


exon

Literature and cross-references HaROXY39HanXRQChr17g0551631
DNA ref. HanXRQ genome:   HanXRQChr17 (72475786..72476160)
Protein sequence: HaROXY39HanXRQChr17g0551631
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   124
PWM (Da):   %s   13452.8  
PI (pH):   %s   7.45
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHYQTESWGT YLPPTTTVND PFHRIERLAA ENAVVIFSLS SCCMCHAIKR LFCGMGVNPT VYELDQQPLG KEMEKALMRL LGTGSPVPVV FVGGKLVGAM DRVMASHING TLVPLLKEAG 
ALWL 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCACTACC AAACCGAATC ATGGGGCACA TACTTGCCAC CCACAACCAC CGTTAACGAC CCATTCCACC GCATCGAACG ACTCGCAGCG GAGAACGCCG TGGTGATATT CAGCCTCAGC  AGCTGCTGCA TGTGTCACGC CATCAAGCGC CTCTTTTGTG GCATGGGTGT CAACCCAACC GTCTACGAAC TTGATCAACA GCCTCTAGGA AAAGAAATGG AGAAAGCGTT GATGCGGCTG  CTTGGAACCG GCTCGCCGGT CCCTGTGGTG TTTGTTGGAG GGAAGCTTGT GGGTGCAATG GATAGAGTTA TGGCTTCTCA TATCAATGGG ACACTTGTGC CTCTTTTGAA AGAGGCTGGT 
GCACTTTGGC TTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCACTACC AAACCGAATC ATGGGGCACA TACTTGCCAC CCACAACCAC CGTTAACGAC CCATTCCACC GCATCGAACG ACTCGCAGCG GAGAACGCCG TGGTGATATT CAGCCTCAGC  AGCTGCTGCA TGTGTCACGC CATCAAGCGC CTCTTTTGTG GCATGGGTGT CAACCCAACC GTCTACGAAC TTGATCAACA GCCTCTAGGA AAAGAAATGG AGAAAGCGTT GATGCGGCTG  CTTGGAACCG GCTCGCCGGT CCCTGTGGTG TTTGTTGGAG GGAAGCTTGT GGGTGCAATG GATAGAGTTA TGGCTTCTCA TATCAATGGG ACACTTGTGC CTCTTTTGAA AGAGGCTGGT 
GCACTTTGGC TTTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCACTACC AAACCGAATC ATGGGGCACA TACTTGCCAC CCACAACCAC CGTTAACGAC CCATTCCACC GCATCGAACG ACTCGCAGCG GAGAACGCCG TGGTGATATT CAGCCTCAGC  AGCTGCTGCA TGTGTCACGC CATCAAGCGC CTCTTTTGTG GCATGGGTGT CAACCCAACC GTCTACGAAC TTGATCAACA GCCTCTAGGA AAAGAAATGG AGAAAGCGTT GATGCGGCTG  CTTGGAACCG GCTCGCCGGT CCCTGTGGTG TTTGTTGGAG GGAAGCTTGT GGGTGCAATG GATAGAGTTA TGGCTTCTCA TATCAATGGG ACACTTGTGC CTCTTTTGAA AGAGGCTGGT 
GCACTTTGGC TTTGA 

Retrieve as FASTA