Entry information : HaTrx03 (HanXRQChr09g0246861)
Entry ID 14491
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-03-08 (Christophe Dunand)
Peroxidase information: HaTrx03 (HanXRQChr09g0246861)
Name (synonym) HaTrx03 (HanXRQChr09g0246861)
Class Other Thioredoxin    [Orthogroup: Trx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaTrx03
start..stop
S start..stop
AtTrx07 189 1e-61 82..199 72..189
ThasTrx07 181 1e-58 65..198 55..187
AtTrx08 147 7e-45 81..197 91..207
HaTrx01 142 2e-43 79..198 67..186
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 64390329..64390672 344 N° 2 64391528..64391602 75 N° 3 64391690..64391756 67 N° 4 64391875..64391892 18
N° 5 64391975..64392079 105  
join(64390329..64390672,64391528..64391602,64391690..64391756,64391875..64391892 ,64391975..64392079)


exon

Literature and cross-references HaTrx03 (HanXRQChr09g0246861)
DNA ref. HanXRQ genome:   HanXRQChr09 (64390329..64392079)
Protein sequence: HaTrx03 (HanXRQChr09g0246861)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   202
PWM (Da):   %s   22660.67  
PI (pH):   %s   8.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRNIPLGLLPQQLRSTPAAAMTDATTLPFQTLHLPSNRLAFSNSGSSSRSLSDFWRFKYDVCTGSLKALSQQRSIPVIDSSSPVSLDLKPILNECQFDHVIHDAQRLDDSVVVLWMAKWCRKCIYLKPTLEKLAADYHPRVKFYCIDVNNVPYQLVVRAGVKMPTIQLWKDGKKQAEVIGGHKAYLVANEVREMIDDEGQP*

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTAACATTCCACTTGGTCTTCTTCCTCAACAACTCCGATCTACACCAGCTGCCGCCATGACCGACGCTACCACACTACCTTTTCAAACACTACATCTTCCATCCAATCGTCTTGCG
TTTTCAAATTCCGGATCTTCTTCAAGGTCCCTTTCAGATTTTTGGAGATTCAAATATGACGTATGCACAGGGAGTTTGAAGGCCTTGAGCCAGCAAAGATCGATTCCGGTTATTGATTCT
TCTTCCCCTGTTTCACTCGACCTCAAACCTATTTTAAACGAATGCCAATTTGATCACGTCATTCATGATGCTCAACGGTTGGATGACTCGGTTGTTGTTTTGTG
GTATGTTTACTGCTTT
AGATTGTTGCAAAATATGTATTTGTTATTATTATGAATATGTATATGATGATTAACATGGGTTTGTATTCTAATTTCATGCTGATACTTTATGTGTTAGGCTTTGTGTTTAGTAGAATCG
GTTTTGCTATTCAAAAGAGGCTTATTACCTAGGGCTCTAAACGAACCGAATGTTCAGCGAACAGTTCGTGAACTGTTCGGCGGGAAGTTGGTGAAAATGAACAAGAAATTCCGTTCGATT
AGTTAAATGAACGAACACGAACAACTGTCTCGTTCGTTCAATTGCGTTCATGAATGTTCGGTAACGTGTTCGTAAACATTCGTTCATGTTCGTTTGTTTATGTTCATTAAATATTTTTTT
AGCATTTATTTATTTTATCTAAATCTTTTATATTCCTTAATTCTTATTTATCTCATTACCCAAACAAATAAAATAGGAAACCCTACCTCCACCTTTCTTTCTTATTATTCACATCGAAAA
ATACAATTGAACTTCGTCGATTTTATCTGTGTTCGTGAACCGTTCATGAACATGTTCATTTCCTTAACAAACGAACACGAACAAAAAATCTCGTTCGGTAAGTGTTCATGAACTGTTCGT
GAACACATAATATTCTTAACGAACGAACACGAACAAGGCCTTGTTCGAGTTCGTTCGGTTCGTTTACAACCCTGGCTGCCTGCCACTATATTGTAATGGCCACCAGTTTCTTAATTTTCA
TCATATTATACAATTTCTATTCAGGATCTTAATCTTATTGCCACATATCAATATTTGATGGGATATGGATCATGTTTAGCCAGAATTATTAGGTGAGCTAATGTTATTTGTGTTCATAGG
ATGGCAAAGTGGTGCAGGAAATGCATATATTTGAAACCAACATTGGAAAAATTGGCAGCTGATTATCACCCAAG
GTTAAAACTTAAAACTCGCCCTTTTGCTCAACTATCGCGATGTTCA
CATTTCTCATACTTACTTGTGTTTGGATATGTTAAAAGCAGGGTAAAGTTTTACTGCATTGATGTCAACAACGTCCCGTATCAGCTTGTGGTTCGGGCTGGGGTCACTGTAAGTCTCTCA
TGCCCGCACAATTAGTTCAGTTTATCATTTTCAGACGTTAACACTTGAATTGTGCAATTTCATGTCATTTGACTCATTTGGGATCGGATGTGCTCTATAATCACAGAAAATGCCAACTAT
ACAG
GTGCACAGATTTATCTAACAATATTTTTATTATGTTTGCTAGCTGTTGCTACCTTCGAAACTAATGTGTTTTGGTATTCCAGCTATGGAAAGATGGGAAGAAACAAGCAGAGGTGA
TCGGAGGTCACAAAGCGTATTTAGTTGCTAACGAGGTTCGTGAAATGATAGATGATGAAGGGCAACCTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTAACATTCCACTTGGTCTTCTTCCTCAACAACTCCGATCTACACCAGCTGCCGCCATGACCGACGCTACCACACTACCTTTTCAAACACTACATCTTCCATCCAATCGTCTTGCG
TTTTCAAATTCCGGATCTTCTTCAAGGTCCCTTTCAGATTTTTGGAGATTCAAATATGACGTATGCACAGGGAGTTTGAAGGCCTTGAGCCAGCAAAGATCGATTCCGGTTATTGATTCT
TCTTCCCCTGTTTCACTCGACCTCAAACCTATTTTAAACGAATGCCAATTTGATCACGTCATTCATGATGCTCAACGGTTGGATGACTCGGTTGTTGTTTTGTG
GATGGCAAAGTGGTGC
AGGAAATGCATATATTTGAAACCAACATTGGAAAAATTGGCAGCTGATTATCACCCAAG
GGTAAAGTTTTACTGCATTGATGTCAACAACGTCCCGTATCAGCTTGTGGTTCGGGCTGGG
GTCACT
AAAATGCCAACTATACAGCTATGGAAAGATGGGAAGAAACAAGCAGAGGTGATCGGAGGTCACAAAGCGTATTTAGTTGCTAACGAGGTTCGTGAAATGATAGATGATGAAGGG
CAACCTTAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTTAGGGAT ATAAAAGTAA AAGTTTGTCC TGTAAATGCG TAACATTCCA CTTGGTCTTC TTCCTCAACA ACTCCGATCT ACACCAGCTG CCGCCATGAC CGACGCTACC ACACTACCTT  TTCAAACACT ACATCTTCCA TCCAATCGTC TTGCGTTTTC AAATTCCGGA TCTTCTTCAA GGTCCCTTTC AGATTTTTGG AGATTCAAAT ATGACGTATG CACAGGGAGT TTGAAGGCCT  TGAGCCAGCA AAGATCGATT CCGGTTATTG ATTCTTCTTC CCCTGTTTCA CTCGACCTCA AACCTATTTT AAACGAATGC CAATTTGATC ACGTCATTCA TGATGCTCAA CGGTTGGATG  ACTCGGTTGT TGTTTTGTGG ATGGCAAAGT GGTGCAGGAA ATGCATATAT TTGAAACCAA CATTGGAAAA ATTGGCAGCT GATTATCACC CAAGGGTAAA GTTTTACTGC ATTGATGTCA  ACAACGTCCC GTATCAGCTT GTGGTTCGGG CTGGGGTCAC TAAAATGCCA ACTATACAGC TATGGAAAGA TGGGAAGAAA CAAGCAGAGG TGATCGGAGG TCACAAAGCG TATTTAGTTG  CTAACGAGGT TCGTGAAATG ATAGATGATG AAGGGCAACC TTAATTTCTT TCTACATATG TTCTTGTTTT TTGTTCTTCT AGAAATGGAC ACATAGATTT GTATATACTG CAGAGAATAA  GCAATAAACT GTTTTTTTTT TTTTTTTTTT TTGCCATATA ATCCCTAATC TGTTGTTTTG GTATCACTTT GTAATTGTAA CCATCATGCA ACAATGCATA CTCTGAAAGC TCATCGTTTT  CGACCATGTG TAAAAACTAT CCGTTACTCA TAAAGAAGAA ATATTTGTTT GTTTTTCCTC ATTTCTTTTT CTCTTCGATG GATGGATGAC CGGATAAAGG ATGTTACGGA CCAATAAGTT 
ATGGAATGAT ATTGTTTGGG CTCTCGT 

Retrieve as FASTA