Entry information : GhPrx10 (Pod10 / podSSH1)
Entry ID 145
Creation 2006-06-21 (Christophe Dunand)
Last sequence changes 2015-06-23 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-05 (Achraf Jemmat)
Peroxidase information: GhPrx10 (Pod10 / podSSH1)
Name (synonym) GhPrx10 (Pod10 / podSSH1)
Class Class III peroxidase    [Orthogroup: Prx005]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635 ]
Cellular localisation N/D
Tissue types Cotyledons
Leaves
Inducer Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value GhPrx10
start..stop
S start..stop
GrPrx10 710 0 1..347 1..347
PtPrx01 478 8e-171 11..347 9..345
PkPrx03 475 7e-170 11..347 10..347
PtPrx98 471 2e-168 11..347 10..349
Literature and cross-references GhPrx10 (Pod10 / podSSH1)
Literature REFERENCE 1 Delannoy et al., Gossypium hirsutum bacterial-induced peroxidase (podSSH1). unpublished.
REFERENCE 2 Coumans JVF, Polijak A, Raftery MJ, et al. Analysis of cotton (Gossypium hirsutum) root proteomes during a compatible interaction with the black root rot fungus Thielaviopsis basicola. PROTEOMICS 9 (2), 335-349.
Protein ref. UniProtKB:   Q8RVP3
mRNA ref. GenBank:   AF488305
Cluster/Prediction ref. UniGene:   Ghi.8105
Protein sequence: GhPrx10 (Pod10 / podSSH1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   347 (319)
PWM (Da):   %s   37301.33 (34286.8)  
PI (pH):   %s   4.6 (4.57) Peptide Signal:   %s   cut: 29 range:29-347
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPEKMACFQY IVAALCFAVL LEGSLSKAQL TPTFYDETCP NVTAIIRHVL VNASFSDPRI GASLIRLHFH DCFVQGCDAS ILLDDPVNGE KEAIPNNNSA RGYEVIDAMK AALESACPNT  VSCADILAIA SEQSVSTLAG GPSWAVPLGR RDGFTANRTL ANSNLPGFNN TLDRLKNRFS NVGLNTSIDL VALSGAHTFG RAQCLTFTSR LYNFTGVGDT DPTLNTTYLE ELRQICPQGG 
NSSVLTNLDP TTPDGFDNNY FTNLQVNRGL LRSDQNLFST EGADTIEIVN RFSSNQTAFF ESFVESMIRM GNISPLTGTE GEIRSNCRAV NSATIRSNSD AALVSSI 

Retrieve as FASTA  
Remarks Complete seqeunce from mRNA. Anionic peroxidase. 2 week old cotyledons. Cultivar="Reba B50".