Entry information : HarPrx20
Entry ID 14519
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-07 (Christophe Dunand)
Peroxidase information: HarPrx20
Name HarPrx20
Class Class III peroxidase    [Orthogroup: Prx102]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus argophyllus    [TaxId: 73275 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HarPrx20
start..stop
S start..stop
HaPrx01_QIR8 639 0 1..320 1..320
HaPrx01 637 0 1..320 1..320
ZePrx14 485 8e-175 1..316 1..317
ZePrx15 484 3e-174 1..316 1..317
Literature and cross-references HarPrx20
EST ref. GenBank:   EE608674.1   EE623255.1 [3' end]
Protein sequence: HarPrx20
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (293)
PWM (Da):   %s   33636.63 (30575.0) Transmb domain:   %s   i7-24o
PI (pH):   %s   4.52 (4.43) Peptide Signal:   %s   cut: 28 range:28-320
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGYNKSTILV TIFIILISVD YFMPCKAQLS TTFYDTTCPN ALSTIQTSIN AAVSRNGRNA ASVIRLHFHD CFVQGCDASL LLGGAGSEKE SAANDGVVGY DVIDDAKAAV ESVCPGVVSC  ADILAVAARD ASVAVGGPSW TVRLGRRDSP DSNAAEAATD LPRGNMNLGE LISNFANKGF NTREMVALSG SHTLGQARCL RFRGRIYNSP LPIDAAFNSS LTAICPPTAP TGDATLQPLD 
LVTPNTFDNN YFLNLRASRG LLISDQVLFN GDSADSIVTE YADNPATFDS DFAAAMVRMS EIEVLTGTSG IIRTVCTSAT 

Retrieve as FASTA  
Remarks Complete sequence from 2 ESTs
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTATA ATAAGTCTAC TATCTTGGTC ACTATATTTA TTATACTTAT ATCAGTGGAC TACTTCATGC CATGCAAAGC TCAGTTGTCA ACCACCTTTT ATGATACCAC ATGCCCTAAT  GCACTTTCAA CCATTCAAAC TTCAATTAAT GCTGCGGTAT CACGTAATGG TCGCAATGCA GCCTCCGTTA TTCGCCTTCA TTTTCATGAT TGTTTCGTTC AGGGTTGTGA TGCATCTCTT  TTGCTAGGAG GTGCTGGCAG TGAGAAGGAG TCAGCAGCCA ATGATGGTGT GGTGGGCTAT GATGTTATAG ATGATGCTAA AGCTGCAGTC GAGAGCGTAT GTCCTGGAGT TGTATCGTGT  GCTGATATAC TCGCGGTTGC AGCTCGTGAT GCTTCTGTCG CGGTTGGGGG GCCGTCATGG ACCGTAAGAC TTGGAAGAAG AGATTCTCCA GATTCAAACG CGGCAGAAGC CGCAACTGAT  CTTCCAAGAG GGAATATGAA TTTAGGTGAA CTTATCAGCA ACTTTGCTAA TAAGGGATTT AACACGAGAG AAATGGTCGC CTTATCAGGA TCTCATACAC TCGGACAGGC CAGATGTCTT  AGGTTTCGGG GAAGGATATA CAACAGTCCT CTACCTATCG ATGCTGCTTT TAATAGCTCC CTTACTGCAA TCTGCCCACC GACTGCACCT ACTGGCGATG CAACCTTGCA ACCACTTGAT  TTAGTGACAC CAAATACATT CGACAACAAC TACTTCCTGA ATCTTCGGGC TAGTAGGGGT CTTCTTATAT CAGACCAAGT ACTCTTTAAC GGAGACTCAG CTGATAGCAT TGTGACCGAG  TACGCTGACA ATCCTGCAAC GTTTGACTCT GATTTTGCTG CAGCCATGGT TAGGATGAGT GAAATTGAAG TCCTTACAGG TACTAGTGGG ATTATAAGGA CTGTTTGCAC TAGTGCAACT 
TAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TATTACTCTT CTTACTCAAG CTAAGCTACT ATCTCTTTAA AAACATTAGG CGCAAACTTT TTCTTTTCTT TTATTTTTCT CTTCAGTAAT ATGGGTTATA ATAAGTCTAC TATCTTGGTC  ACTATATTTA TTATACTTAT ATCAGTGGAC TACTTCATGC CATGCAAAGC TCAGTTGTCA ACCACCTTTT ATGATACCAC ATGCCCTAAT GCACTTTCAA CCATTCAAAC TTCAATTAAT  GCTGCGGTAT CACGTAATGG TCGCAATGCA GCCTCCGTTA TTCGCCTTCA TTTTCATGAT TGTTTCGTTC AGGGTTGTGA TGCATCTCTT TTGCTAGGAG GTGCTGGCAG TGAGAAGGAG  TCAGCAGCCA ATGATGGTGT GGTGGGCTAT GATGTTATAG ATGATGCTAA AGCTGCAGTC GAGAGCGTAT GTCCTGGAGT TGTATCGTGT GCTGATATAC TCGCGGTTGC AGCTCGTGAT  GCTTCTGTCG CGGTTGGGGG GCCGTCATGG ACCGTAAGAC TTGGAAGAAG AGATTCTCCA GATTCAAACG CGGCAGAAGC CGCAACTGAT CTTCCAAGAG GGAATATGAA TTTAGGTGAA  CTTATCAGCA ACTTTGCTAA TAAGGGATTT AACACGAGAG AAATGGTCGC CTTATCAGGA TCTCATACAC TCGGACAGGC CAGATGTCTT AGGTTTCGGG GAAGGATATA CAACAGTCCT  CTACCTATCG ATGCTGCTTT TAATAGCTCC CTTACTGCAA TCTGCCCACC GACTGCACCT ACTGGCGATG CAACCTTGCA ACCACTTGAT TTAGTGACAC CAAATACATT CGACAACAAC  TACTTCCTGA ATCTTCGGGC TAGTAGGGGT CTTCTTATAT CAGACCAAGT ACTCTTTAAC GGAGACTCAG CTGATAGCAT TGTGACCGAG TACGCTGACA ATCCTGCAAC GTTTGACTCT  GATTTTGCTG CAGCCATGGT TAGGATGAGT GAAATTGAAG TCCTTACAGG TACTAGTGGG ATTATAAGGA CTGTTTGCAC TAGTGCAACT TAAGAAAACG GAGATGTAAA GTGATATTAT 
GTTAGTGTTG ACGATTTGCA GACACAAACA AGTATTCTGC ATGGTCGATC TGTTAATCAC GTACAATGAA TAAAAGTCTC CTTTCAATC 

Retrieve as FASTA