Entry information : HaENODL20HanXRQChr15g0487951
Entry ID 14539
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaENODL20HanXRQChr15g0487951
Name HaENODL20HanXRQChr15g0487951
Class Early nodulin     [Orthogroup: ENODL007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaENODL20
start..stop
S start..stop
HarENODL19 261 3e-91 1..164 1..162
HaENODL19 261 3e-91 1..164 1..162
HaENODL04 236 5e-81 1..166 1..168
ThasENODL13 123 2e-36 8..133 5..129
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 103879284..103879479 196 N° 2 103877045..103877379 335  
complement(join(103877045..103877379,103879284..103879479))


exon

Literature and cross-references HaENODL20HanXRQChr15g0487951
DNA ref. HanXRQ genome:   HanXRQChr15 (103879479..103877045)
Protein sequence: HaENODL20HanXRQChr15g0487951
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   176 (147)
PWM (Da):   %s   19817.14 (16856.6) Transmb domain:   %s   o10-29i152-174o
PI (pH):   %s   8.91 (8.75) Peptide Signal:   %s   cut: 30 range:30-176
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRRSGGGLQLQTALAVFVVLAAMLTCAVCRNPVRYLVGGNDNRWKPNVNYTNWSLQQVFYVGDWLYFVYDKNLYNVLEVNETSYRNCSDQGFILDITRGAGRDVFELTQPKRYYFLSSGGYCYNGMKVSINVVEFVPAPQGSQSSMIRCINPLVLSIVIVVWAVLVRNLGFTIIRA

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAAGATCAGGTGGCGGTTTACAGCTGCAGACAGCATTGGCGGTCTTTGTGGTCCTGGCGGCGATGCTAACATGCGCTGTGTGTAGAAATCCGGTGCGTTACCTCGTCGGCGGTAAT
GATAATAGGTGGAAACCTAATGTTAACTACACCAATTGGTCGCTTCAGCAGGTTTTCTACGTCGGCGACTGGCTTT
GTAATTAACCATCTCTCTCTCTCTCTCTCTCTATATATATATAT
ATATATGTCTCATATACACACAGATATTCAAACAATTATACAGTAATTACATTACTGTAGTACTTTTTTTTTGTCAATGATAGTCATCGAATCCTAACGGAAACGTGATAGATCTCCTAA
ATTTAAAGGCGTTTTTTCGAAGTTTTGTCGCAAGCGTTTGAATGTTCATCGGCTGACTACTTTATTCATTGATGGCAAATTTAATTTAAATAATCTCAGCTTTCTCAATTTGGCCGATAA
TAATCCTAATTTAGTTATTGGCCGATAATAATCCAAACTGATACACTTTTGGCCAATAATAGTCTGCGTTAAATATAGATTAACGAAATTAAGTTTTTTTCCGAATTACAAACTGATGTT
TTAGGGTTTTTGATTAGAATGAGGATACGAGTTGATTGATGTAAAATTTACCTCGAAATACTGTTTCAAACGACGAAAACGGTGCTTCAATTCGGGTGTTTAAACTTCTTATTAACAAAA
ATCAAGCCGCTTGAAGCATCGTTTCGAGGTAAGTTTTACACAAATCAACTCGTATCCTCGTTTGGATCAAAATCAATAAAATATCAGTTTGTTAATTCGGAAAAAAGCTTAACTCCGTTA
AACTATCTTTAACGGCGGACTATTATCGGCCAAAAGTGTATCAGTTCGGATTATTATCGGCTAAGGGTGAAGGGGGTGCTCACCTAATAGGTGAGTCCCCTCTCTTACGCCAAACCAATC
CCCGTGTGCCACGTCAACTCCCCTCTTAAACTCCCCTAACACCCCAATTTGATGGCGCCACTCCCCTCTTAGGTGAATTGTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAGGAAAGCTG
TGATTGGTCCCTTCTCCCTCTCTCCTCTCTCTCTCCTCCCTCTCTCTTCGGTGCCTCCACCCCCATTTTCTTCCCCGATTCACTCCCCCGCCTTAATGGCGGTACCCCCCTAATCGGCAT
CTCTCCTCCCCGATTGAAGTCACCGAGTACGCCCCGCCTGCCCTAATAACTGAGTTGGAATTATTATCGGGCAAATTGAGAAAGCTGGAATTATTTAAATCCAATTTTCCTTCATTTATT
TAGTTTCTATTTAGTAAATTATCTAAAGTTTATGTTTAGATTTTTTGCTGATAGCTATGTTAAAGTGATTCATCTGCTCTAGTTAAATTATTCATGATTATATAGTTCGGATCTTGTGTT
TAAAATAACATCTATTGTGGATTTTGTTTTCGGTTTCCATGTTTTCGAAATTTCATAGCATTTTTGAACGTTCCGCGACTACTCTAATAAAATTTGTAGCTCGGAAAATTGTCGAACTAG
ACACGTTGACTTTAAAATTTAGTAAACATGGAAATTGAGGTGGCAAACAAGCATCGCCAGCTAAGACGCCTAGGAATTAACCTAGCACGTAAACTCTCGTAAGTCGTAAAGCACACTGAG
GACCACACCACACGTGAACCACTGAAAGGCAACGCATGTAAAAGTAGGGGCTAAGCCGGCAGTTAAATATTAGCTGGCCTTTACACGTGTATTAATTTATTTGGCTATTCTTGTGGGTTA
AGCCTTAGATGGCACCGAAATTTATCTGGTTATGTTTATTTGGCGTATTAGATTGGTTGGTTTAAAATGTCTATTTCTATAATGTTTAATAGTCAATGCCTATTTTGTAAAAAAAAAGTG
AGTCAAACGCATCTATTTTTCACGATTTTCACTTTTAGTTTCTATATAGTAAATTATCTGCGGTCAATTTGGAATTTGTTCATATATTTTGGTGATAGATAATTAGATATGATAAGGTAA
TTAACTCGTATCTTCATCTATTCAGATCTCGTGTTTAAACTAAAAACAAACCTATTACAGATTTCGTGTACGATAAGAACTTGTACAACGTGTTGGAGGTGAACGAAACAAGCTACAGGA
ACTGCAGTGATCAAGGATTCATCTTAGACATCACGAGAGGCGCAGGGCGTGATGTGTTTGAGCTCACTCAACCGAAACGATACTATTTCCTTTCAAGTGGAGGTTACTGCTACAATGGAA
TGAAAGTTAGCATCAATGTGGTTGAATTCGTTCCTGCTCCTCAAGGTTCTCAGTCCAGTATGATTAGATGCATTAATCCGCTCGTTTTGTCGATTGTGATCGTTGTTTGGGCTGTTTTGG
TTCGCAATCTAGGTTTCACTATAATTCGCGCTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAAGATCAGGTGGCGGTTTACAGCTGCAGACAGCATTGGCGGTCTTTGTGGTCCTGGCGGCGATGCTAACATGCGCTGTGTGTAGAAATCCGGTGCGTTACCTCGTCGGCGGTAAT
GATAATAGGTGGAAACCTAATGTTAACTACACCAATTGGTCGCTTCAGCAGGTTTTCTACGTCGGCGACTGGCTTT
ATTTCGTGTACGATAAGAACTTGTACAACGTGTTGGAGGTGAAC
GAAACAAGCTACAGGAACTGCAGTGATCAAGGATTCATCTTAGACATCACGAGAGGCGCAGGGCGTGATGTGTTTGAGCTCACTCAACCGAAACGATACTATTTCCTTTCAAGTGGAGGT
TACTGCTACAATGGAATGAAAGTTAGCATCAATGTGGTTGAATTCGTTCCTGCTCCTCAAGGTTCTCAGTCCAGTATGATTAGATGCATTAATCCGCTCGTTTTGTCGATTGTGATCGTT
GTTTGGGCTGTTTTGGTTCGCAATCTAGGTTTCACTATAATTCGCGCTTAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAAGAT CAGGTGGCGG TTTACAGCTG CAGACAGCAT TGGCGGTCTT TGTGGTCCTG GCGGCGATGC TAACATGCGC TGTGTGTAGA AATCCGGTGC GTTACCTCGT CGGCGGTAAT  GATAATAGGT GGAAACCTAA TGTTAACTAC ACCAATTGGT CGCTTCAGCA GGTTTTCTAC GTCGGCGACT GGCTTTATTT CGTGTACGAT AAGAACTTGT ACAACGTGTT GGAGGTGAAC  GAAACAAGCT ACAGGAACTG CAGTGATCAA GGATTCATCT TAGACATCAC GAGAGGCGCA GGGCGTGATG TGTTTGAGCT CACTCAACCG AAACGATACT ATTTCCTTTC AAGTGGAGGT  TACTGCTACA ATGGAATGAA AGTTAGCATC AATGTGGTTG AATTCGTTCC TGCTCCTCAA GGTTCTCAGT CCAGTATGAT TAGATGCATT AATCCGCTCG TTTTGTCGAT TGTGATCGTT 
GTTTGGGCTG TTTTGGTTCG CAATCTAGGT TTCACTATAA TTCGCGCTTA A 

Retrieve as FASTA