Entry information : HaCRX01HanXRQChr05g0129941
Entry ID 14544
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCRX01HanXRQChr05g0129941
Name HaCRX01HanXRQChr05g0129941
Class Other cupredoxin Protein    [Orthogroup: CRX001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX01
start..stop
S start..stop
HaSTC05 291 1e-103 1..146 1..146
HaSTC13 250 8e-88 1..127 1..127
HaSTC14 211 1e-72 39..146 1..108
HaSTC27 168 4e-55 15..144 1..130
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4167830..4168270 441  
complement(join(4167830..4168270))


exon

Literature and cross-references HaCRX01HanXRQChr05g0129941
DNA ref. HanXRQ genome:   HanXRQChr05 (4168270..4167830)
Protein sequence: HaCRX01HanXRQChr05g0129941
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   146
PWM (Da):   %s   16036.71 Transmb domain:   %s   i21-43o
PI (pH):   %s   4.64
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAAKLLKNT RDKKMVAFKS NMFVFMAIVA SMTFCISAME HAVGDDSGWV TPENPNFYID WAANKTFTVG DTLLFDFYTG LHDVTPVIKE DYDRCSVTVP GTTIKTGPAT LNLYIPGDHY 
FICSMDGDCL DNQKLAIHVV DNDSSN 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCAG CGAAGCTACT GAAAAACACA AGGGATAAAA AAATGGTTGC TTTCAAATCT AATATGTTTG TTTTTATGGC CATAGTTGCA TCCATGACAT TTTGTATCTC CGCGATGGAG  CATGCGGTGG GTGACGACTC TGGCTGGGTT ACTCCTGAAA ATCCCAATTT CTACATCGAT TGGGCTGCAA ACAAAACCTT CACCGTTGGT GACACTCTGC TCTTTGACTT TTACACCGGA  TTACATGATG TTACACCAGT GATTAAAGAG GACTACGATC GTTGTAGCGT CACGGTACCC GGAACTACCA TAAAAACTGG TCCTGCCACC CTAAACTTGT ACATCCCTGG AGATCATTAT 
TTCATTTGTT CCATGGACGG GGATTGCTTG GATAATCAAA AATTAGCAAT TCATGTTGTA GACAATGACT CAAGTAATTG A 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCAG CGAAGCTACT GAAAAACACA AGGGATAAAA AAATGGTTGC TTTCAAATCT AATATGTTTG TTTTTATGGC CATAGTTGCA TCCATGACAT TTTGTATCTC CGCGATGGAG  CATGCGGTGG GTGACGACTC TGGCTGGGTT ACTCCTGAAA ATCCCAATTT CTACATCGAT TGGGCTGCAA ACAAAACCTT CACCGTTGGT GACACTCTGC TCTTTGACTT TTACACCGGA  TTACATGATG TTACACCAGT GATTAAAGAG GACTACGATC GTTGTAGCGT CACGGTACCC GGAACTACCA TAAAAACTGG TCCTGCCACC CTAAACTTGT ACATCCCTGG AGATCATTAT 
TTCATTTGTT CCATGGACGG GGATTGCTTG GATAATCAAA AATTAGCAAT TCATGTTGTA GACAATGACT CAAGTAATTG A 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCAG CGAAGCTACT GAAAAACACA AGGGATAAAA AAATGGTTGC TTTCAAATCT AATATGTTTG TTTTTATGGC CATAGTTGCA TCCATGACAT TTTGTATCTC CGCGATGGAG  CATGCGGTGG GTGACGACTC TGGCTGGGTT ACTCCTGAAA ATCCCAATTT CTACATCGAT TGGGCTGCAA ACAAAACCTT CACCGTTGGT GACACTCTGC TCTTTGACTT TTACACCGGA  TTACATGATG TTACACCAGT GATTAAAGAG GACTACGATC GTTGTAGCGT CACGGTACCC GGAACTACCA TAAAAACTGG TCCTGCCACC CTAAACTTGT ACATCCCTGG AGATCATTAT 
TTCATTTGTT CCATGGACGG GGATTGCTTG GATAATCAAA AATTAGCAAT TCATGTTGTA GACAATGACT CAAGTAATTG A 

Retrieve as FASTA