Entry information : HaCRX04 (HanXRQChr05g0145361)
Entry ID 14547
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-12-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-12-08 (Christophe Dunand)
Peroxidase information: HaCRX04 (HanXRQChr05g0145361)
Name (synonym) HaCRX04 (HanXRQChr05g0145361)
Class Other cupredoxin Protein    [Orthogroup: CRX002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX04
start..stop
S start..stop
HaCRX02 288 1e-102 1..138 1..138
HaCRX03 160 5e-52 1..137 1..143
HaSTC30 136 3e-43 1..78 23..100
HaCRX05 123 7e-38 45..138 18..113
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 129990643..129990811 169 N° 2 129990908..129991155 248  
join(129990643..129990811,129990908..129991155)


exon

Literature and cross-references HaCRX04 (HanXRQChr05g0145361)
DNA ref. HanXRQ genome:   HanXRQChr05 (129990643..129991155)
Protein sequence: HaCRX04 (HanXRQChr05g0145361)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   138 (114)
PWM (Da):   %s   15247.76 (12576.3)  
PI (pH):   %s   7.79 (6.75) Peptide Signal:   %s   cut: 25 range:25-138
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MANKNLCIFILIATIVTQATWVRAVEYTVGECKGWNEGVDFQAWADGKQYVQGDRLVFNYEYGKHNVVLLPDQASLDNCNLEKPLISLAHCGRNVVNLRTPGRVFVSSAVGEDCKKGLKFWVDVKPCPAVLQGAHYIT

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAACAAAAATTTGTGTATATTCATCCTCATAGCAACAATAGTGACTCAAGCTACATGGGTTCGAGCTGTGGAATATACGGTTGGTGAATGTAAAGGTTGGAACGAGGGTGTTGAT
TTCCAAGCTTGGGCCGACGGGAAGCAATATGTTCAAGGAGACAGACTTG
GTATATTCTTATACATAATTAATCATACATGATTTGATTTGTTGGTGTTTTTAATAAGTCTTCTACCTAAT
TAAATTATCTATATTGCTGATGCAGTTTTCAATTACGAATACGGAAAACACAATGTAGTGTTACTACCAGATCAAGCCTCATTGGATAACTGTAATCTTGAGAAACCACTTATATCACTC
GCTCATTGTGGAAGGAATGTTGTCAACCTACGTACCCCGGGAAGGGTTTTTGTATCCAGTGCCGTCGGAGAGGATTGTAAGAAAGGCCTGAAGTTTTGGGTCGATGTCAAGCCATGTCCT
GCAGTACTGCAAGGAGCACACTACATAACTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAACAAAAATTTGTGTATATTCATCCTCATAGCAACAATAGTGACTCAAGCTACATGGGTTCGAGCTGTGGAATATACGGTTGGTGAATGTAAAGGTTGGAACGAGGGTGTTGAT
TTCCAAGCTTGGGCCGACGGGAAGCAATATGTTCAAGGAGACAGACTTG
TTTTCAATTACGAATACGGAAAACACAATGTAGTGTTACTACCAGATCAAGCCTCATTGGATAACTGTAAT
CTTGAGAAACCACTTATATCACTCGCTCATTGTGGAAGGAATGTTGTCAACCTACGTACCCCGGGAAGGGTTTTTGTATCCAGTGCCGTCGGAGAGGATTGTAAGAAAGGCCTGAAGTTT
TGGGTCGATGTCAAGCCATGTCCTGCAGTACTGCAAGGAGCACACTACATAACTTAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCAACAAGAA GCAATTAAAA TGGCTAACAA AAATTTGTGT ATATTCATCC TCATAGCAAC AATAGTGACT CAAGCTACAT GGGTTCGAGC TGTGGAATAT ACGGTTGGTG AATGTAAAGG  TTGGAACGAG GGTGTTGATT TCCAAGCTTG GGCCGACGGG AAGCAATATG TTCAAGGAGA CAGACTTGTT TTCAATTACG AATACGGAAA ACACAATGTA GTGTTACTAC CAGATCAAGC  CTCATTGGAT AACTGTAATC TTGAGAAACC ACTTATATCA CTCGCTCATT GTGGAAGGAA TGTTGTCAAC CTACGTACCC CGGGAAGGGT TTTTGTATCC AGTGCCGTCG GAGAGGATTG  TAAGAAAGGC CTGAAGTTTT GGGTCGATGT CAAGCCATGT CCTGCAGTAC TGCAAGGAGC ACACTACATA ACTTAAAATT GAGGATTGCG TGTCTCGGCT TTTATACATT TTTTTTTGTG  TGTGTGTTTG TTAATAATTG TTCATATCTG CTAGGGTTTA ATGTTAATGG CTTTCTTGCC TCCTCTATTC TCATTCATCA AATATATATA GACATGTACA AAACCCTAGA ATTAATTACA 
ATTGACATAA TTATGGAA 

Retrieve as FASTA