Entry information : HaCRX11HanXRQChr12g0355931
Entry ID 14552
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCRX11HanXRQChr12g0355931
Name HaCRX11HanXRQChr12g0355931
Class Other cupredoxin Protein    [Orthogroup: CRX001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX11
start..stop
S start..stop
HaCRX13 121 6e-37 1..132 1..130
HaCRX12 120 1e-36 1..132 1..130
HaCRX17 115 1e-34 1..136 1..133
HaCRX16 114 4e-34 1..130 1..126
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4546294..4546704 411  
join(4546294..4546704)


exon

Literature and cross-references HaCRX11HanXRQChr12g0355931
DNA ref. HanXRQ genome:   HanXRQChr12 (4546294..4546704)
Protein sequence: HaCRX11HanXRQChr12g0355931
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   136 (110)
PWM (Da):   %s   15514.71 (12671.2)  
PI (pH):   %s   8.47 (8.07) Peptide Signal:   %s   cut: 27 range:27-136
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTSLKLNLVV VTTIVVAYLH FPTTMASNNW IVGGPRGWIV PPNPDYYESW KKGKEFFNSD EYWFVFKNRS HNVIDVNKEA FDACDPNKDT NATYITETRT RGVVFMTAGI KYLICSHHCS 
KGHKIMIDVK ESKEEW 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACATCTT TGAAGTTGAA TCTTGTGGTG GTCACGACCA TCGTGGTCGC ATATTTGCAT TTTCCCACAA CAATGGCTAG TAATAACTGG ATTGTAGGTG GTCCTCGCGG GTGGATTGTG  CCTCCGAATC CCGATTATTA TGAATCATGG AAGAAAGGAA AGGAATTTTT CAATTCCGAC GAATATTGGT TTGTCTTTAA AAACAGATCG CATAACGTCA TAGATGTAAA TAAGGAGGCG  TTCGACGCAT GTGACCCCAA CAAGGACACC AACGCCACGT ATATCACTGA AACGAGGACT AGAGGTGTCG TGTTCATGAC CGCTGGCATT AAATATCTCA TTTGCTCACA TCATTGTTCA 
AAAGGCCACA AAATAATGAT CGACGTCAAA GAGTCAAAAG AAGAGTGGTA G 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACATCTT TGAAGTTGAA TCTTGTGGTG GTCACGACCA TCGTGGTCGC ATATTTGCAT TTTCCCACAA CAATGGCTAG TAATAACTGG ATTGTAGGTG GTCCTCGCGG GTGGATTGTG  CCTCCGAATC CCGATTATTA TGAATCATGG AAGAAAGGAA AGGAATTTTT CAATTCCGAC GAATATTGGT TTGTCTTTAA AAACAGATCG CATAACGTCA TAGATGTAAA TAAGGAGGCG  TTCGACGCAT GTGACCCCAA CAAGGACACC AACGCCACGT ATATCACTGA AACGAGGACT AGAGGTGTCG TGTTCATGAC CGCTGGCATT AAATATCTCA TTTGCTCACA TCATTGTTCA 
AAAGGCCACA AAATAATGAT CGACGTCAAA GAGTCAAAAG AAGAGTGGTA G 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACATCTT TGAAGTTGAA TCTTGTGGTG GTCACGACCA TCGTGGTCGC ATATTTGCAT TTTCCCACAA CAATGGCTAG TAATAACTGG ATTGTAGGTG GTCCTCGCGG GTGGATTGTG  CCTCCGAATC CCGATTATTA TGAATCATGG AAGAAAGGAA AGGAATTTTT CAATTCCGAC GAATATTGGT TTGTCTTTAA AAACAGATCG CATAACGTCA TAGATGTAAA TAAGGAGGCG  TTCGACGCAT GTGACCCCAA CAAGGACACC AACGCCACGT ATATCACTGA AACGAGGACT AGAGGTGTCG TGTTCATGAC CGCTGGCATT AAATATCTCA TTTGCTCACA TCATTGTTCA 
AAAGGCCACA AAATAATGAT CGACGTCAAA GAGTCAAAAG AAGAGTGGTA G 

Retrieve as FASTA