Entry information : HaCRX12HanXRQChr12g0355941
Entry ID 14553
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCRX12HanXRQChr12g0355941
Name HaCRX12HanXRQChr12g0355941
Class Other cupredoxin Protein    [Orthogroup: CRX001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX12
start..stop
S start..stop
HaCRX13 257 8e-91 1..130 1..130
HaCRX11 120 1e-36 1..130 1..132
HaCRX17 113 8e-34 1..129 1..128
HaCRX18 112 2e-33 4..130 11..135
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4549562..4549954 393  
join(4549562..4549954)


exon

Literature and cross-references HaCRX12HanXRQChr12g0355941
DNA ref. HanXRQ genome:   HanXRQChr12 (4549562..4549954)
Protein sequence: HaCRX12HanXRQChr12g0355941
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   130 (104)
PWM (Da):   %s   14406.21 (11631.7) Transmb domain:   %s   o10-32i
PI (pH):   %s   8.62 (8.46) Peptide Signal:   %s   cut: 27 range:27-130
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASLRLTFAV VTTIVVACMH FPTTLAATGY VVGGANGWSM PQKPNHYENW TKGKRFIKGD AFFWVFKEGQ HFVAEVPSKE AWDACNTTAS TTVDVTGQLI EYLVDVKTHY YVCKYHCSKG 
MKVIIDIKAS 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCTT TGAGACTAAC TTTTGCTGTG GTTACGACCA TTGTGGTCGC ATGTATGCAT TTTCCCACAA CGTTGGCTGC AACCGGCTAC GTAGTCGGTG GTGCCAATGG GTGGTCTATG  CCTCAAAAAC CCAACCATTA TGAGAATTGG ACAAAAGGAA AGAGATTCAT CAAAGGCGAT GCATTCTTTT GGGTGTTTAA AGAAGGACAA CATTTCGTCG CAGAAGTACC ATCAAAGGAG  GCGTGGGACG CATGCAACAC CACCGCTTCT ACCACAGTTG ATGTAACGGG TCAACTCATT GAATACCTTG TGGATGTTAA AACTCACTAT TACGTTTGCA AATACCATTG TTCAAAGGGT 
ATGAAAGTAA TCATCGATAT CAAAGCTTCG TAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCTT TGAGACTAAC TTTTGCTGTG GTTACGACCA TTGTGGTCGC ATGTATGCAT TTTCCCACAA CGTTGGCTGC AACCGGCTAC GTAGTCGGTG GTGCCAATGG GTGGTCTATG  CCTCAAAAAC CCAACCATTA TGAGAATTGG ACAAAAGGAA AGAGATTCAT CAAAGGCGAT GCATTCTTTT GGGTGTTTAA AGAAGGACAA CATTTCGTCG CAGAAGTACC ATCAAAGGAG  GCGTGGGACG CATGCAACAC CACCGCTTCT ACCACAGTTG ATGTAACGGG TCAACTCATT GAATACCTTG TGGATGTTAA AACTCACTAT TACGTTTGCA AATACCATTG TTCAAAGGGT 
ATGAAAGTAA TCATCGATAT CAAAGCTTCG TAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCTT TGAGACTAAC TTTTGCTGTG GTTACGACCA TTGTGGTCGC ATGTATGCAT TTTCCCACAA CGTTGGCTGC AACCGGCTAC GTAGTCGGTG GTGCCAATGG GTGGTCTATG  CCTCAAAAAC CCAACCATTA TGAGAATTGG ACAAAAGGAA AGAGATTCAT CAAAGGCGAT GCATTCTTTT GGGTGTTTAA AGAAGGACAA CATTTCGTCG CAGAAGTACC ATCAAAGGAG  GCGTGGGACG CATGCAACAC CACCGCTTCT ACCACAGTTG ATGTAACGGG TCAACTCATT GAATACCTTG TGGATGTTAA AACTCACTAT TACGTTTGCA AATACCATTG TTCAAAGGGT 
ATGAAAGTAA TCATCGATAT CAAAGCTTCG TAG 

Retrieve as FASTA