Entry information : HaCRX13HanXRQChr12g0355951
Entry ID 14554
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCRX13HanXRQChr12g0355951
Name HaCRX13HanXRQChr12g0355951
Class Other cupredoxin Protein    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX13
start..stop
S start..stop
HaCRX12 257 8e-91 1..130 1..130
HaCRX11 121 6e-37 1..130 1..132
HaCRX17 113 9e-34 1..129 1..128
HaCRX18 112 1e-33 4..130 11..135
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4607946..4608338 393  
join(4607946..4608338)


exon

Literature and cross-references HaCRX13HanXRQChr12g0355951
DNA ref. HanXRQ genome:   HanXRQChr12 (4607946..4608338)
Protein sequence: HaCRX13HanXRQChr12g0355951
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   130 (104)
PWM (Da):   %s   14262.14 (11551.7) Transmb domain:   %s   o10-32i
PI (pH):   %s   8.32 (8.06) Peptide Signal:   %s   cut: 27 range:27-130
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASLRLTFAV VTAIVVACMH LPTTLAATGY VVGGANGWSM PQKPNHYENW TKGKRFIKGD AFFWVFKEGQ HFVVEVPSKE AYDACNTTAS TEVDGTGGLI EYLVDVKTHY YVCKYHCSKG 
MKVIIDIKAS 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCTT TGAGACTAAC TTTTGCTGTG GTTACGGCCA TTGTGGTCGC ATGTATGCAT TTGCCCACAA CGTTGGCTGC AACCGGCTAT GTAGTCGGTG GTGCCAATGG GTGGTCTATG  CCTCAAAAGC CCAACCATTA TGAGAATTGG ACAAAAGGAA AGAGATTTAT CAAAGGCGAT GCATTCTTTT GGGTGTTTAA AGAAGGACAA CATTTCGTCG TAGAAGTACC ATCAAAGGAG  GCGTACGATG CATGCAACAC CACCGCTTCT ACCGAAGTTG ATGGAACGGG TGGACTCATT GAATACCTTG TTGATGTTAA AACTCACTAT TACGTTTGCA AATATCATTG TTCAAAGGGT 
ATGAAAGTAA TCATCGATAT CAAAGCTTCG TAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCTT TGAGACTAAC TTTTGCTGTG GTTACGGCCA TTGTGGTCGC ATGTATGCAT TTGCCCACAA CGTTGGCTGC AACCGGCTAT GTAGTCGGTG GTGCCAATGG GTGGTCTATG  CCTCAAAAGC CCAACCATTA TGAGAATTGG ACAAAAGGAA AGAGATTTAT CAAAGGCGAT GCATTCTTTT GGGTGTTTAA AGAAGGACAA CATTTCGTCG TAGAAGTACC ATCAAAGGAG  GCGTACGATG CATGCAACAC CACCGCTTCT ACCGAAGTTG ATGGAACGGG TGGACTCATT GAATACCTTG TTGATGTTAA AACTCACTAT TACGTTTGCA AATATCATTG TTCAAAGGGT 
ATGAAAGTAA TCATCGATAT CAAAGCTTCG TAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCTT TGAGACTAAC TTTTGCTGTG GTTACGGCCA TTGTGGTCGC ATGTATGCAT TTGCCCACAA CGTTGGCTGC AACCGGCTAT GTAGTCGGTG GTGCCAATGG GTGGTCTATG  CCTCAAAAGC CCAACCATTA TGAGAATTGG ACAAAAGGAA AGAGATTTAT CAAAGGCGAT GCATTCTTTT GGGTGTTTAA AGAAGGACAA CATTTCGTCG TAGAAGTACC ATCAAAGGAG  GCGTACGATG CATGCAACAC CACCGCTTCT ACCGAAGTTG ATGGAACGGG TGGACTCATT GAATACCTTG TTGATGTTAA AACTCACTAT TACGTTTGCA AATATCATTG TTCAAAGGGT 
ATGAAAGTAA TCATCGATAT CAAAGCTTCG TAGTTTGTAA TTGCTTAACG ATT 

Retrieve as FASTA