Entry information : HaCRX15HanXRQChr12g0356721
Entry ID 14556
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCRX15HanXRQChr12g0356721
Name HaCRX15HanXRQChr12g0356721
Class Other cupredoxin Protein    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX15
start..stop
S start..stop
HaCRX14 102 3e-28 6..117 16..132
HaCRX10 98 6e-27 6..120 14..132
HaCRX08 93 2e-25 9..119 17..131
HaCRX09 92 5e-25 1..117 8..128
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6470799..6471161 363  
join(6470799..6471161)


exon

Literature and cross-references HaCRX15HanXRQChr12g0356721
DNA ref. HanXRQ genome:   HanXRQChr12 (6470799..6471161)
Protein sequence: HaCRX15HanXRQChr12g0356721
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   120 (102)
PWM (Da):   %s   13210.81 (11192.8)  
PI (pH):   %s   8.96 (8.86) Peptide Signal:   %s   cut: 19 range:19-120
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVMIIMVAC MRFHVTLAGE VITVGGPLGW NVPKNPKDYT LWSGKQKFLT TDVLWFTGKD SVAEVKEKAY YSCDIKNPVR LITSGPDRIT LLTPGSHFFI CTKLDHCNLG QKFVANVSPS 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGTTA TGATCATCAT GGTGGCATGT ATGCGGTTTC ATGTCACGCT GGCCGGAGAA GTGATTACTG TCGGCGGTCC CCTTGGCTGG AATGTTCCTA AAAACCCGAA AGATTACACC  CTGTGGTCAG GGAAACAAAA ATTTTTGACA ACTGATGTTC TTTGGTTTAC CGGAAAGGAT TCGGTCGCAG AAGTGAAGGA GAAAGCGTAC TACTCGTGCG ACATAAAAAA CCCCGTTCGA  CTTATCACGT CCGGCCCTGA CCGAATCACA TTGTTGACAC CAGGCTCCCA CTTTTTCATT TGCACCAAAC TAGATCATTG CAACCTTGGT CAGAAGTTTG TAGCCAATGT CTCCCCTAGC 
TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGTTA TGATCATCAT GGTGGCATGT ATGCGGTTTC ATGTCACGCT GGCCGGAGAA GTGATTACTG TCGGCGGTCC CCTTGGCTGG AATGTTCCTA AAAACCCGAA AGATTACACC  CTGTGGTCAG GGAAACAAAA ATTTTTGACA ACTGATGTTC TTTGGTTTAC CGGAAAGGAT TCGGTCGCAG AAGTGAAGGA GAAAGCGTAC TACTCGTGCG ACATAAAAAA CCCCGTTCGA  CTTATCACGT CCGGCCCTGA CCGAATCACA TTGTTGACAC CAGGCTCCCA CTTTTTCATT TGCACCAAAC TAGATCATTG CAACCTTGGT CAGAAGTTTG TAGCCAATGT CTCCCCTAGC 
TAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGTTA TGATCATCAT GGTGGCATGT ATGCGGTTTC ATGTCACGCT GGCCGGAGAA GTGATTACTG TCGGCGGTCC CCTTGGCTGG AATGTTCCTA AAAACCCGAA AGATTACACC  CTGTGGTCAG GGAAACAAAA ATTTTTGACA ACTGATGTTC TTTGGTTTAC CGGAAAGGAT TCGGTCGCAG AAGTGAAGGA GAAAGCGTAC TACTCGTGCG ACATAAAAAA CCCCGTTCGA  CTTATCACGT CCGGCCCTGA CCGAATCACA TTGTTGACAC CAGGCTCCCA CTTTTTCATT TGCACCAAAC TAGATCATTG CAACCTTGGT CAGAAGTTTG TAGCCAATGT CTCCCCTAGC 
TAA 

Retrieve as FASTA