Entry information : HaCRX16HanXRQChr12g0358661
Entry ID 14557
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCRX16HanXRQChr12g0358661
Name HaCRX16HanXRQChr12g0358661
Class Other cupredoxin Protein    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX16
start..stop
S start..stop
HaCRX17 239 9e-84 1..132 1..133
HaCRX18 135 2e-42 4..128 11..135
HaCRX11 114 4e-34 1..126 1..130
HaCRX13 110 1e-32 1..126 1..128
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14309073..14309471 399  
complement(join(14309073..14309471))


exon

Literature and cross-references HaCRX16HanXRQChr12g0358661
DNA ref. HanXRQ genome:   HanXRQChr12 (14309471..14309073)
Protein sequence: HaCRX16HanXRQChr12g0358661
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   132
PWM (Da):   %s   14729.49 Transmb domain:   %s   i7-29o
PI (pH):   %s   7.5
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPYLKLNLVA VTIIVIAYMH VSTTVPSLHF VGGIGGWVAP PEPNYYEKWV KGENFFRFDA LVFIFDTGSH TLAEVTKEAY DTCNTTNPIY IDTWGPATVR LNVVGVHFYI CTMYCKSGQK 
ITVDVKPRNI TF 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCATATT TAAAGTTAAA TCTTGTGGCA GTAACTATTA TTGTGATAGC ATATATGCAT GTTTCCACAA CGGTGCCATC TTTGCATTTC GTCGGCGGTA TAGGAGGGTG GGTTGCGCCT  CCGGAGCCAA ACTACTACGA AAAATGGGTA AAAGGAGAGA ATTTCTTCAG ATTCGATGCT CTCGTTTTTA TTTTTGATAC CGGAAGTCAT ACCCTTGCAG AAGTGACAAA GGAGGCATAC  GATACATGCA ACACCACTAA CCCCATATAT ATCGATACCT GGGGTCCTGC CACAGTTAGA TTAAATGTTG TTGGTGTGCA CTTTTATATT TGCACAATGT ATTGTAAAAG TGGACAGAAA 
ATAACCGTCG ACGTCAAACC AAGAAATATT ACTTTCTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCATATT TAAAGTTAAA TCTTGTGGCA GTAACTATTA TTGTGATAGC ATATATGCAT GTTTCCACAA CGGTGCCATC TTTGCATTTC GTCGGCGGTA TAGGAGGGTG GGTTGCGCCT  CCGGAGCCAA ACTACTACGA AAAATGGGTA AAAGGAGAGA ATTTCTTCAG ATTCGATGCT CTCGTTTTTA TTTTTGATAC CGGAAGTCAT ACCCTTGCAG AAGTGACAAA GGAGGCATAC  GATACATGCA ACACCACTAA CCCCATATAT ATCGATACCT GGGGTCCTGC CACAGTTAGA TTAAATGTTG TTGGTGTGCA CTTTTATATT TGCACAATGT ATTGTAAAAG TGGACAGAAA 
ATAACCGTCG ACGTCAAACC AAGAAATATT ACTTTCTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCATATT TAAAGTTAAA TCTTGTGGCA GTAACTATTA TTGTGATAGC ATATATGCAT GTTTCCACAA CGGTGCCATC TTTGCATTTC GTCGGCGGTA TAGGAGGGTG GGTTGCGCCT  CCGGAGCCAA ACTACTACGA AAAATGGGTA AAAGGAGAGA ATTTCTTCAG ATTCGATGCT CTCGTTTTTA TTTTTGATAC CGGAAGTCAT ACCCTTGCAG AAGTGACAAA GGAGGCATAC  GATACATGCA ACACCACTAA CCCCATATAT ATCGATACCT GGGGTCCTGC CACAGTTAGA TTAAATGTTG TTGGTGTGCA CTTTTATATT TGCACAATGT ATTGTAAAAG TGGACAGAAA 
ATAACCGTCG ACGTCAAACC AAGAAATATT ACTTTCTGA 

Retrieve as FASTA