Entry information : HaCRX17HanXRQChr12g0359151
Entry ID 14558
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCRX17HanXRQChr12g0359151
Name HaCRX17HanXRQChr12g0359151
Class Other cupredoxin Protein    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX17
start..stop
S start..stop
HaCRX16 239 9e-84 1..133 1..132
HaCRX18 139 5e-44 4..129 11..135
HaCRX11 115 1e-34 1..133 1..136
HaCRX12 113 8e-34 1..128 1..129
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 16057057..16057458 402  
complement(join(16057057..16057458))


exon

Literature and cross-references HaCRX17HanXRQChr12g0359151
DNA ref. HanXRQ genome:   HanXRQChr12 (16057458..16057057)
Protein sequence: HaCRX17HanXRQChr12g0359151
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   133
PWM (Da):   %s   14923.45  
PI (pH):   %s   6.34
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPYLKLNLVA VTIIVMAYMH VSTMVRPSLH FVGGIEGWVP PPEPNYYEKW VKGEKFLKYD TAIFIFDTGS HTLAEVTKEA YDTCNTTNPI YIDTWGPAAV ELDTVGVHFY ICTMHCKSGQ 
KITVDVKPRN DTF 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCATATT TGAAGTTAAA TCTTGTGGCA GTTACCATCA TTGTGATGGC ATATATGCAT GTTTCCACAA TGGTGCGCCC ATCTTTGCAC TTCGTCGGCG GTATAGAAGG GTGGGTTCCG  CCTCCTGAGC CAAACTACTA CGAAAAATGG GTAAAAGGAG AGAAGTTCTT GAAATATGAT ACTGCCATTT TTATTTTTGA TACCGGAAGT CATACCCTCG CAGAAGTGAC AAAGGAGGCA  TACGATACAT GCAACACCAC TAACCCCATA TATATCGATA CATGGGGTCC TGCCGCAGTT GAATTGGATA CTGTTGGTGT GCACTTTTAT ATTTGCACAA TGCATTGTAA AAGTGGTCAG 
AAAATAACCG TCGACGTCAA ACCAAGAAAT GATACTTTCT GA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCATATT TGAAGTTAAA TCTTGTGGCA GTTACCATCA TTGTGATGGC ATATATGCAT GTTTCCACAA TGGTGCGCCC ATCTTTGCAC TTCGTCGGCG GTATAGAAGG GTGGGTTCCG  CCTCCTGAGC CAAACTACTA CGAAAAATGG GTAAAAGGAG AGAAGTTCTT GAAATATGAT ACTGCCATTT TTATTTTTGA TACCGGAAGT CATACCCTCG CAGAAGTGAC AAAGGAGGCA  TACGATACAT GCAACACCAC TAACCCCATA TATATCGATA CATGGGGTCC TGCCGCAGTT GAATTGGATA CTGTTGGTGT GCACTTTTAT ATTTGCACAA TGCATTGTAA AAGTGGTCAG 
AAAATAACCG TCGACGTCAA ACCAAGAAAT GATACTTTCT GA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCATATT TGAAGTTAAA TCTTGTGGCA GTTACCATCA TTGTGATGGC ATATATGCAT GTTTCCACAA TGGTGCGCCC ATCTTTGCAC TTCGTCGGCG GTATAGAAGG GTGGGTTCCG  CCTCCTGAGC CAAACTACTA CGAAAAATGG GTAAAAGGAG AGAAGTTCTT GAAATATGAT ACTGCCATTT TTATTTTTGA TACCGGAAGT CATACCCTCG CAGAAGTGAC AAAGGAGGCA  TACGATACAT GCAACACCAC TAACCCCATA TATATCGATA CATGGGGTCC TGCCGCAGTT GAATTGGATA CTGTTGGTGT GCACTTTTAT ATTTGCACAA TGCATTGTAA AAGTGGTCAG 
AAAATAACCG TCGACGTCAA ACCAAGAAAT GATACTTTCT GA 

Retrieve as FASTA