Entry information : HaCRX18HanXRQChr12g0359221
Entry ID 14559
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCRX18HanXRQChr12g0359221
Name HaCRX18HanXRQChr12g0359221
Class Other cupredoxin Protein    [Orthogroup: CRX001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCRX18
start..stop
S start..stop
HaCRX17 139 5e-44 11..135 4..129
HaCRX16 135 2e-42 11..135 4..128
HaCRX13 112 2e-33 11..135 4..130
HaCRX12 112 2e-33 11..135 4..130
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 16287138..16287545 408  
join(16287138..16287545)


exon

Literature and cross-references HaCRX18HanXRQChr12g0359221
DNA ref. HanXRQ genome:   HanXRQChr12 (16287138..16287545)
Protein sequence: HaCRX18HanXRQChr12g0359221
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   135
PWM (Da):   %s   14695.44 Transmb domain:   %s   i13-35o
PI (pH):   %s   8.62
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKANNPSTKI MRLNLVVVTA IAMAYAQIPA TLSFYIHLVG GKAWDVPSKP NHYETWAKGE KFTKDDILVF DFCTGMHTVA EVPKVAYDTC NTTAAKTIET LGPTTVTVSN VGMYFFICTK 
HCQSGQKVAI DVKPS 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAGCCA ACAACCCTTC AACCAAAATT ATGAGGTTAA ATCTTGTAGT AGTTACCGCC ATCGCGATGG CATATGCCCA AATTCCTGCA ACGTTGTCTT TTTATATACA TTTAGTTGGC  GGTAAAGCGT GGGATGTGCC TTCGAAACCC AACCATTACG AAACATGGGC AAAAGGAGAG AAATTCACCA AAGACGATAT TCTTGTGTTT GATTTTTGTA CTGGAATGCA TACCGTCGCG  GAAGTGCCAA AGGTGGCATA CGACACATGC AACACCACCG CCGCCAAGAC CATCGAAACA TTGGGTCCCA CCACAGTCAC CGTGTCAAAT GTTGGCATGT ACTTTTTTAT TTGTACAAAG 
CATTGTCAAA GTGGTCAAAA AGTAGCCATC GACGTCAAAC CATCGTAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAGCCA ACAACCCTTC AACCAAAATT ATGAGGTTAA ATCTTGTAGT AGTTACCGCC ATCGCGATGG CATATGCCCA AATTCCTGCA ACGTTGTCTT TTTATATACA TTTAGTTGGC  GGTAAAGCGT GGGATGTGCC TTCGAAACCC AACCATTACG AAACATGGGC AAAAGGAGAG AAATTCACCA AAGACGATAT TCTTGTGTTT GATTTTTGTA CTGGAATGCA TACCGTCGCG  GAAGTGCCAA AGGTGGCATA CGACACATGC AACACCACCG CCGCCAAGAC CATCGAAACA TTGGGTCCCA CCACAGTCAC CGTGTCAAAT GTTGGCATGT ACTTTTTTAT TTGTACAAAG 
CATTGTCAAA GTGGTCAAAA AGTAGCCATC GACGTCAAAC CATCGTAG 

Retrieve as FASTA  
cDNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAGCCA ACAACCCTTC AACCAAAATT ATGAGGTTAA ATCTTGTAGT AGTTACCGCC ATCGCGATGG CATATGCCCA AATTCCTGCA ACGTTGTCTT TTTATATACA TTTAGTTGGC  GGTAAAGCGT GGGATGTGCC TTCGAAACCC AACCATTACG AAACATGGGC AAAAGGAGAG AAATTCACCA AAGACGATAT TCTTGTGTTT GATTTTTGTA CTGGAATGCA TACCGTCGCG  GAAGTGCCAA AGGTGGCATA CGACACATGC AACACCACCG CCGCCAAGAC CATCGAAACA TTGGGTCCCA CCACAGTCAC CGTGTCAAAT GTTGGCATGT ACTTTTTTAT TTGTACAAAG 
CATTGTCAAA GTGGTCAAAA AGTAGCCATC GACGTCAAAC CATCGTAG 

Retrieve as FASTA