Entry information : HaPNC13(HanXRQChr11g0340461)
Entry ID 14567
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2020-02-03 (Catherine )
Peroxidase information: HaPNC13(HanXRQChr11g0340461)
Name HaPNC13(HanXRQChr11g0340461)
Class Plantacyanin    [Orthogroup: PNC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type Fruits
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPNC13
start..stop
S start..stop
HaPNC21 258 3e-91 1..126 1..126
HaPNC19 258 3e-91 1..126 1..126
HaPNC10 258 3e-91 1..126 1..126
HaPNC09-1 258 3e-91 1..126 1..126
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 111234032..111234209 178 N° 2 111233374..111233576 203  
complement(join(111233374..111233576,111234032..111234209))


exon

Literature and cross-references HaPNC13(HanXRQChr11g0340461)
EST ref. GenBank:   DW355126.1
Protein sequence: HaPNC13(HanXRQChr11g0340461)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   126 (97)
PWM (Da):   %s   13483.42 (10493.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.44 (4.54) Peptide Signal:   %s   cut: 30 range:30-126
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAEGRGSVVVSMVVLCLLVVAFQCEVAQAATYVVGDDNGWTFSVAGWENGKNFNAGDVLVFNYPQGAHNVVVVNKESYDGCNTTPSEAKVYTSGNDQITLVKGYNNFICSYFGHCDSGMKIQIFVS

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAGGGAAGAGGCAGTGTAGTGGTGTCAATGGTGGTGCTTTGTCTACTAGTGGTGGCATTTCAATGCGAGGTAGCTCAAGCAGCTACTTATGTTGTCGGCGATGACAATGGCTGG
ACGTTTAGTGTTGCTGGCTGGGAAAACGGCAAGAATTTCAACGCAGGCGATGTCCTTG
GTATCCTCTCAACATGAGGTCACCACTTTTGTCACTTCAGTCCAAGAATGAAACGTTTTGCA
TCTGGGTCCTGATGTTTCATTTTTGTTGTCATTTTCATCCAATTGGCAAAGTGGGTTAGAATTTTCCGTTAACTACTCCCCTTTTTTTGGTTTCCTCATTTAAATGAAGGGTATAATCGT
CATTTTATGTCATAATATATTTAATTAAATGAGAAAAACGACAAAAATGTTGAAGTTAACAGAAAATTCTAACTCAGATTGCCAATTGGATTAATATGGCAACAAAAATGAAACGTCAGG
TGCCCAGATGCAAAACGTTTCATTTTTGAACTGAAGTGGTAAAAGTGGCCTAAACTAAAAGACCATTTTGGCATTTTACACTAAAATATAATAGTTAAGTAATTACAAAGAAATGCTTAT
TTTAGTTCAATTGTTATTATATGATTGGAACAGTGTTTAACTACCCACAAGGAGCACATAATGTGGTGGTCGTGAACAAGGAAAGCTATGATGGGTGCAACACAACCCCAAGCGAAGCAA
AGGTGTACACAAGTGGAAATGACCAAATTACCCTTGTGAAGGGTTATAACAACTTCATTTGTAGTTACTTTGGTCACTGTGATAGTGGCATGAAGATTCAAATCTTTGTATCTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAGGGAAGAGGCAGTGTAGTGGTGTCAATGGTGGTGCTTTGTCTACTAGTGGTGGCATTTCAATGCGAGGTAGCTCAAGCAGCTACTTATGTTGTCGGCGATGACAATGGCTGG
ACGTTTAGTGTTGCTGGCTGGGAAAACGGCAAGAATTTCAACGCAGGCGATGTCCTTG
TGTTTAACTACCCACAAGGAGCACATAATGTGGTGGTCGTGAACAAGGAAAGCTATGATGGG
TGCAACACAACCCCAAGCGAAGCAAAGGTGTACACAAGTGGAAATGACCAAATTACCCTTGTGAAGGGTTATAACAACTTCATTTGTAGTTACTTTGGTCACTGTGATAGTGGCATGAAG
ATTCAAATCTTTGTATCTTAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAGG GAAGAGGCAG TGTAGTGGTG TCAATGGTGG TGCTTTGTCT ACTAGTGGTG GCATTTCAAT GCGAGGTAGC TCAAGCAGCT ACTTATGTTG TCGGCGATGA CAATGGCTGG  ACGTTTAGTG TTGCTGGCTG GGAAAACGGC AAGAATTTCA ACGCAGGCGA TGTCCTTGTG TTTAACTACC CACAAGGAGC ACATAATGTG GTGGTCGTGA ACAAGGAAAG CTATGATGGG  TGCAACACAA CCCCAAGCGA AGCAAAGGTG TACACAAGTG GAAATGACCA AATTACCCTT GTGAAGGGTT ATAACAACTT CATTTGTAGT TACTTTGGTC ACTGTGATAG TGGCATGAAG 
ATTCAAATCT TTGTATCTTA A 

Retrieve as FASTA