Entry information : HaSTC04HanXRQChr01g0023261
Entry ID 14579
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC04HanXRQChr01g0023261
Name HaSTC04HanXRQChr01g0023261
Class Stellacyanin    [Orthogroup: STC002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC04
start..stop
S start..stop
HaSTC20 256 3e-90 1..131 1..131
HaSTC26 251 2e-88 1..131 1..131
HaSTC27 222 8e-77 1..128 1..130
HaSTC25 210 2e-72 12..127 1..118
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 129464059..129464454 396  
complement(join(129464059..129464454))


exon

Literature and cross-references HaSTC04HanXRQChr01g0023261
DNA ref. HanXRQ genome:   HanXRQChr01 (129464454..129464059)
Protein sequence: HaSTC04HanXRQChr01g0023261
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   131 (108)
PWM (Da):   %s   14510.87 (11978.8)  
PI (pH):   %s   6.61 (6.62) Peptide Signal:   %s   cut: 24 range:24-131
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGAFNFNMVV FMVMVASMTF CSSATQHIVG DAFGWVIPNN RNLYTDWASQ RMFTLGDSLV FHFLTGDVTE VSKDDYDHCH VSNPRSTIKT SPAIINLTSP GDHYYICSLE GHCIFHQKLA 
INVVMKSSCS K 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGCTT TTAACTTTAA TATGGTTGTT TTTATGGTCA TGGTTGCATC CATGACATTC TGTAGCTCAG CGACGCAACA TATTGTGGGC GACGCCTTTG GCTGGGTTAT TCCTAACAAC  CGCAATCTCT ACACTGACTG GGCATCACAA AGGATGTTCA CTCTCGGTGA CTCTTTAGTC TTTCACTTTC TTACCGGAGA TGTAACAGAA GTGTCTAAGG ATGACTACGA TCATTGTCAC  GTTAGTAACC CAAGATCCAC CATAAAAACC AGCCCTGCAA TCATCAACTT GACAAGCCCC GGAGACCACT ATTACATCTG TTCATTGGAG GGACATTGCA TATTTCATCA GAAATTAGCA 
ATTAATGTTG TAATGAAATC TTCTTGCTCA AAGTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGCTT TTAACTTTAA TATGGTTGTT TTTATGGTCA TGGTTGCATC CATGACATTC TGTAGCTCAG CGACGCAACA TATTGTGGGC GACGCCTTTG GCTGGGTTAT TCCTAACAAC  CGCAATCTCT ACACTGACTG GGCATCACAA AGGATGTTCA CTCTCGGTGA CTCTTTAGTC TTTCACTTTC TTACCGGAGA TGTAACAGAA GTGTCTAAGG ATGACTACGA TCATTGTCAC  GTTAGTAACC CAAGATCCAC CATAAAAACC AGCCCTGCAA TCATCAACTT GACAAGCCCC GGAGACCACT ATTACATCTG TTCATTGGAG GGACATTGCA TATTTCATCA GAAATTAGCA 
ATTAATGTTG TAATGAAATC TTCTTGCTCA AAGTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGCTT TTAACTTTAA TATGGTTGTT TTTATGGTCA TGGTTGCATC CATGACATTC TGTAGCTCAG CGACGCAACA TATTGTGGGC GACGCCTTTG GCTGGGTTAT TCCTAACAAC  CGCAATCTCT ACACTGACTG GGCATCACAA AGGATGTTCA CTCTCGGTGA CTCTTTAGTC TTTCACTTTC TTACCGGAGA TGTAACAGAA GTGTCTAAGG ATGACTACGA TCATTGTCAC  GTTAGTAACC CAAGATCCAC CATAAAAACC AGCCCTGCAA TCATCAACTT GACAAGCCCC GGAGACCACT ATTACATCTG TTCATTGGAG GGACATTGCA TATTTCATCA GAAATTAGCA 
ATTAATGTTG TAATGAAATC TTCTTGCTCA AAGTAA 

Retrieve as FASTA