Entry information : HaSTC13HanXRQChr05g0149091
Entry ID 14588
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC13HanXRQChr05g0149091
Name HaSTC13HanXRQChr05g0149091
Class Stellacyanin    [Orthogroup: STC002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC13
start..stop
S start..stop
HaSTC05 253 1e-88 1..127 1..127
HaCRX01 250 8e-88 1..127 1..127
HaSTC14 174 3e-58 39..127 1..89
HaSTC20 155 3e-50 15..127 1..111
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 155589664..155590068 405  
complement(join(155589664..155590068))


exon

Literature and cross-references HaSTC13HanXRQChr05g0149091
DNA ref. HanXRQ genome:   HanXRQChr05 (155590068..155589664)
Protein sequence: HaSTC13HanXRQChr05g0149091
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   134
PWM (Da):   %s   14714.28 Transmb domain:   %s   i21-43o
PI (pH):   %s   6.77
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAAKLLKNT RDKKMVAFKF NMFVFMAIVA SMTFCSSAME HAVGDDSGWI TPKNPNFYAD WAAKKTFTVG DTLLFDFYTG LHDVTPVIKE DYDRCSVTVP GTTIKTGPAT LNLYIPGDHY 
FISSMDGIAC IIKN 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCAG CGAAGCTACT GAAAAACACA AGGGATAAAA AAATGGTTGC TTTCAAATTT AATATGTTTG TTTTTATGGC CATAGTTGCA TCCATGACAT TTTGTAGCTC CGCGATGGAG  CATGCGGTGG GTGATGACTC TGGCTGGATT ACTCCTAAAA ATCCCAATTT CTACGCCGAT TGGGCTGCAA AAAAAACCTT CACCGTTGGT GACACTCTGC TCTTTGACTT TTACACCGGA  TTACATGATG TCACACCAGT GATTAAAGAG GACTACGATC GTTGTAGCGT CACGGTACCC GGAACTACCA TAAAAACTGG TCCTGCCACC CTAAACTTGT ACATCCCTGG AGATCATTAT 
TTCATTTCTT CCATGGATGG GATTGCTTGT ATAATCAAAA ATTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCAG CGAAGCTACT GAAAAACACA AGGGATAAAA AAATGGTTGC TTTCAAATTT AATATGTTTG TTTTTATGGC CATAGTTGCA TCCATGACAT TTTGTAGCTC CGCGATGGAG  CATGCGGTGG GTGATGACTC TGGCTGGATT ACTCCTAAAA ATCCCAATTT CTACGCCGAT TGGGCTGCAA AAAAAACCTT CACCGTTGGT GACACTCTGC TCTTTGACTT TTACACCGGA  TTACATGATG TCACACCAGT GATTAAAGAG GACTACGATC GTTGTAGCGT CACGGTACCC GGAACTACCA TAAAAACTGG TCCTGCCACC CTAAACTTGT ACATCCCTGG AGATCATTAT 
TTCATTTCTT CCATGGATGG GATTGCTTGT ATAATCAAAA ATTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCAG CGAAGCTACT GAAAAACACA AGGGATAAAA AAATGGTTGC TTTCAAATTT AATATGTTTG TTTTTATGGC CATAGTTGCA TCCATGACAT TTTGTAGCTC CGCGATGGAG  CATGCGGTGG GTGATGACTC TGGCTGGATT ACTCCTAAAA ATCCCAATTT CTACGCCGAT TGGGCTGCAA AAAAAACCTT CACCGTTGGT GACACTCTGC TCTTTGACTT TTACACCGGA  TTACATGATG TCACACCAGT GATTAAAGAG GACTACGATC GTTGTAGCGT CACGGTACCC GGAACTACCA TAAAAACTGG TCCTGCCACC CTAAACTTGT ACATCCCTGG AGATCATTAT 
TTCATTTCTT CCATGGATGG GATTGCTTGT ATAATCAAAA ATTAG 

Retrieve as FASTA