Entry information : HaSTC18HanXRQChr06g0180361
Entry ID 14593
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC18HanXRQChr06g0180361
Name HaSTC18HanXRQChr06g0180361
Class Stellacyanin    [Orthogroup: STC002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC18
start..stop
S start..stop
HaSTC27 114 6e-34 1..122 1..125
HaSTC20 106 3e-31 1..122 1..123
HaSTC26 104 2e-30 1..122 1..123
HaSTC25 102 9e-30 12..127 1..119
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 62322994..62323377 384  
join(62322994..62323377)


exon

Literature and cross-references HaSTC18HanXRQChr06g0180361
DNA ref. HanXRQ genome:   HanXRQChr06 (62322994..62323377)
Protein sequence: HaSTC18HanXRQChr06g0180361
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   127 (105)
PWM (Da):   %s   14051.67 (11578.5)  
PI (pH):   %s   6.13 (6.13) Peptide Signal:   %s   cut: 23 range:23-127
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTPFNFNMLM FMAMLVAPMA LATQHVVGDN DGWSNPRYPE FYAEWASLHT FNVGDTLFFN FTKEAHDVAE VPQEAYDQCH TEGAKVIIKS AGAVKLTSCG AHHYISTRKG DCETHQKVAL 
YVQPSSV 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACACCAT TCAACTTCAA CATGCTTATG TTTATGGCCA TGTTGGTTGC ACCCATGGCC TTGGCGACCC AGCACGTGGT GGGCGATAAC GACGGATGGA GTAATCCGAG GTACCCAGAG  TTCTACGCCG AGTGGGCATC CTTACACACC TTCAACGTCG GAGACACTCT CTTTTTTAAC TTTACCAAAG AAGCCCATGA TGTCGCGGAA GTTCCTCAAG AAGCGTACGA TCAATGTCAT  ACCGAAGGCG CTAAAGTCAT CATCAAAAGT GCTGGCGCGG TCAAGTTGAC CAGCTGCGGA GCACACCACT ACATCTCTAC GCGTAAGGGT GATTGCGAGA CACATCAGAA GGTAGCCTTA 
TATGTCCAAC CTTCCTCCGT TTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACACCAT TCAACTTCAA CATGCTTATG TTTATGGCCA TGTTGGTTGC ACCCATGGCC TTGGCGACCC AGCACGTGGT GGGCGATAAC GACGGATGGA GTAATCCGAG GTACCCAGAG  TTCTACGCCG AGTGGGCATC CTTACACACC TTCAACGTCG GAGACACTCT CTTTTTTAAC TTTACCAAAG AAGCCCATGA TGTCGCGGAA GTTCCTCAAG AAGCGTACGA TCAATGTCAT  ACCGAAGGCG CTAAAGTCAT CATCAAAAGT GCTGGCGCGG TCAAGTTGAC CAGCTGCGGA GCACACCACT ACATCTCTAC GCGTAAGGGT GATTGCGAGA CACATCAGAA GGTAGCCTTA 
TATGTCCAAC CTTCCTCCGT TTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACACCAT TCAACTTCAA CATGCTTATG TTTATGGCCA TGTTGGTTGC ACCCATGGCC TTGGCGACCC AGCACGTGGT GGGCGATAAC GACGGATGGA GTAATCCGAG GTACCCAGAG  TTCTACGCCG AGTGGGCATC CTTACACACC TTCAACGTCG GAGACACTCT CTTTTTTAAC TTTACCAAAG AAGCCCATGA TGTCGCGGAA GTTCCTCAAG AAGCGTACGA TCAATGTCAT  ACCGAAGGCG CTAAAGTCAT CATCAAAAGT GCTGGCGCGG TCAAGTTGAC CAGCTGCGGA GCACACCACT ACATCTCTAC GCGTAAGGGT GATTGCGAGA CACATCAGAA GGTAGCCTTA 
TATGTCCAAC CTTCCTCCGT TTGA 

Retrieve as FASTA