Entry information : HaSTC20HanXRQChr10g0306241
Entry ID 14595
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC20HanXRQChr10g0306241
Name HaSTC20HanXRQChr10g0306241
Class Stellacyanin    [Orthogroup: STC002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC20
start..stop
S start..stop
HaSTC26 260 6e-92 1..131 1..131
HaSTC04 256 3e-90 1..131 1..131
HaSTC27 222 6e-77 1..128 1..130
HaSTC25 219 7e-76 12..127 1..118
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 195220941..195221336 396  
join(195220941..195221336)


exon

Literature and cross-references HaSTC20HanXRQChr10g0306241
DNA ref. HanXRQ genome:   HanXRQChr10 (195220941..195221336)
Protein sequence: HaSTC20HanXRQChr10g0306241
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   131 (108)
PWM (Da):   %s   14236.66 (11764.6)  
PI (pH):   %s   5.79 (5.79) Peptide Signal:   %s   cut: 25 range:24-131
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSFNFNMVV FMALVASMAF CSSATQHIVG DASGWVIPNN HNLYTDWASQ RMFTVGDSLV FDFLTGDVTE VSKDDYDHCH VSNPGSTIKT SPAIINLTSP GDHYYICSLE GHCIFHQKLA 
INVVMKSSCS K 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTCTT TTAACTTTAA TATGGTTGTT TTTATGGCTC TGGTTGCATC CATGGCATTC TGTAGCTCAG CGACGCAACA TATTGTGGGT GACGCCTCTG GCTGGGTTAT TCCTAACAAC  CACAATCTCT ACACTGACTG GGCATCACAA AGGATGTTCA CTGTCGGTGA CTCTTTAGTA TTTGACTTTC TTACCGGAGA TGTAACAGAA GTGTCTAAGG ATGACTACGA TCATTGTCAC  GTTAGTAACC CAGGATCCAC AATAAAAACC AGCCCTGCAA TCATCAACTT GACAAGCCCC GGAGACCACT ATTACATCTG TTCATTGGAG GGACATTGCA TATTTCATCA GAAATTAGCA 
ATTAATGTCG TAATGAAATC TTCTTGCTCA AAGTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTCTT TTAACTTTAA TATGGTTGTT TTTATGGCTC TGGTTGCATC CATGGCATTC TGTAGCTCAG CGACGCAACA TATTGTGGGT GACGCCTCTG GCTGGGTTAT TCCTAACAAC  CACAATCTCT ACACTGACTG GGCATCACAA AGGATGTTCA CTGTCGGTGA CTCTTTAGTA TTTGACTTTC TTACCGGAGA TGTAACAGAA GTGTCTAAGG ATGACTACGA TCATTGTCAC  GTTAGTAACC CAGGATCCAC AATAAAAACC AGCCCTGCAA TCATCAACTT GACAAGCCCC GGAGACCACT ATTACATCTG TTCATTGGAG GGACATTGCA TATTTCATCA GAAATTAGCA 
ATTAATGTCG TAATGAAATC TTCTTGCTCA AAGTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTCTT TTAACTTTAA TATGGTTGTT TTTATGGCTC TGGTTGCATC CATGGCATTC TGTAGCTCAG CGACGCAACA TATTGTGGGT GACGCCTCTG GCTGGGTTAT TCCTAACAAC  CACAATCTCT ACACTGACTG GGCATCACAA AGGATGTTCA CTGTCGGTGA CTCTTTAGTA TTTGACTTTC TTACCGGAGA TGTAACAGAA GTGTCTAAGG ATGACTACGA TCATTGTCAC  GTTAGTAACC CAGGATCCAC AATAAAAACC AGCCCTGCAA TCATCAACTT GACAAGCCCC GGAGACCACT ATTACATCTG TTCATTGGAG GGACATTGCA TATTTCATCA GAAATTAGCA 
ATTAATGTCG TAATGAAATC TTCTTGCTCA AAGTAA 

Retrieve as FASTA