Entry information : HaSTC26HanXRQChr13g0415081
Entry ID 14601
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC26HanXRQChr13g0415081
Name HaSTC26HanXRQChr13g0415081
Class Stellacyanin    [Orthogroup: STC002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC26
start..stop
S start..stop
HaSTC20 260 6e-92 1..131 1..131
HaSTC04 251 2e-88 1..131 1..131
HaSTC27 221 3e-76 1..128 1..130
HaSTC25 211 2e-72 12..127 1..118
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 156017512..156017907 396  
complement(join(156017512..156017907))


exon

Literature and cross-references HaSTC26HanXRQChr13g0415081
DNA ref. HanXRQ genome:   HanXRQChr13 (156017907..156017512)
Protein sequence: HaSTC26HanXRQChr13g0415081
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   131 (107)
PWM (Da):   %s   14293.57 (11732.5)  
PI (pH):   %s   4.69 (4.69) Peptide Signal:   %s   cut: 25 range:25-131
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGAYNFNMVV FMAMVASMAF CSSATQHIVG DASGWVIPSN HNLYTDWASQ RMFTVGDSLV FDFLTGDVTE VSKDDYDDCH VSNPESTIKT SPAIINLTCP GDHYYICSLE GHCIFHQKLA 
INVVMKSSCS K 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGCTT ATAACTTTAA TATGGTTGTT TTTATGGCCA TGGTTGCATC CATGGCATTC TGTAGCTCAG CGACGCAACA TATTGTGGGC GACGCCTCTG GCTGGGTTAT TCCTAGCAAC  CACAATCTCT ACACGGACTG GGCATCACAA AGGATGTTCA CTGTCGGTGA CTCTTTAGTA TTTGACTTTC TTACAGGAGA TGTAACAGAA GTGTCTAAGG ATGACTACGA TGATTGTCAC  GTTAGTAACC CAGAATCCAC CATAAAAACC AGCCCTGCAA TCATCAACTT GACATGCCCC GGAGACCACT ATTACATCTG TTCATTGGAG GGACATTGCA TATTTCATCA GAAATTAGCA 
ATTAATGTCG TAATGAAATC TTCTTGCTCA AAGTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGCTT ATAACTTTAA TATGGTTGTT TTTATGGCCA TGGTTGCATC CATGGCATTC TGTAGCTCAG CGACGCAACA TATTGTGGGC GACGCCTCTG GCTGGGTTAT TCCTAGCAAC  CACAATCTCT ACACGGACTG GGCATCACAA AGGATGTTCA CTGTCGGTGA CTCTTTAGTA TTTGACTTTC TTACAGGAGA TGTAACAGAA GTGTCTAAGG ATGACTACGA TGATTGTCAC  GTTAGTAACC CAGAATCCAC CATAAAAACC AGCCCTGCAA TCATCAACTT GACATGCCCC GGAGACCACT ATTACATCTG TTCATTGGAG GGACATTGCA TATTTCATCA GAAATTAGCA 
ATTAATGTCG TAATGAAATC TTCTTGCTCA AAGTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGCTT ATAACTTTAA TATGGTTGTT TTTATGGCCA TGGTTGCATC CATGGCATTC TGTAGCTCAG CGACGCAACA TATTGTGGGC GACGCCTCTG GCTGGGTTAT TCCTAGCAAC  CACAATCTCT ACACGGACTG GGCATCACAA AGGATGTTCA CTGTCGGTGA CTCTTTAGTA TTTGACTTTC TTACAGGAGA TGTAACAGAA GTGTCTAAGG ATGACTACGA TGATTGTCAC  GTTAGTAACC CAGAATCCAC CATAAAAACC AGCCCTGCAA TCATCAACTT GACATGCCCC GGAGACCACT ATTACATCTG TTCATTGGAG GGACATTGCA TATTTCATCA GAAATTAGCA 
ATTAATGTCG TAATGAAATC TTCTTGCTCA AAGTAA 

Retrieve as FASTA