Entry information : HaSTC27HanXRQChr13g0415091
Entry ID 14602
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC27HanXRQChr13g0415091
Name HaSTC27HanXRQChr13g0415091
Class Stellacyanin    [Orthogroup: STC002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC27
start..stop
S start..stop
HaSTC20 222 6e-77 1..130 1..128
HaSTC04 222 8e-77 1..130 1..128
HaSTC26 221 3e-76 1..130 1..128
HaSTC25 211 8e-73 12..129 1..118
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 156062164..156062559 396  
complement(join(156062164..156062559))


exon

Literature and cross-references HaSTC27HanXRQChr13g0415091
DNA ref. HanXRQ genome:   HanXRQChr13 (156062559..156062164)
Protein sequence: HaSTC27HanXRQChr13g0415091
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   131 (108)
PWM (Da):   %s   14284.7 (11819.6)  
PI (pH):   %s   5.33 (5.33) Peptide Signal:   %s   cut: 24 range:24-131
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNAFNFNMVV LMAMVASVAF CSSATQHTVG DAFGWVIPSN PNLYTDWVSQ RMFIVGDTLV FDFPTGTHDV TEVSKDDYDH CHVGNPTSII KTGPATINLT SPGDHYYICS LEGHCMFHQK 
LAINVVMNSS L 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATGCTT TCAATTTTAA TATGGTTGTT TTGATGGCCA TGGTTGCATC CGTGGCATTT TGTAGCTCGG CGACACAACA TACGGTGGGC GACGCTTTTG GCTGGGTTAT TCCTAGCAAC  CCAAATCTCT ATACTGACTG GGTATCTCAA AGGATGTTCA TTGTTGGTGA CACTCTAGTC TTTGACTTTC CCACCGGAAC ACATGATGTA ACAGAAGTGT CTAAGGATGA CTACGATCAT  TGTCACGTTG GTAACCCAAC ATCCATCATA AAAACCGGCC CTGCAACCAT CAACTTGACC AGCCCTGGAG ATCACTATTA CATCTGTTCA TTGGAGGGAC ATTGCATGTT TCATCAGAAA 
TTAGCAATTA ATGTTGTAAT GAATTCTTCA CTTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATGCTT TCAATTTTAA TATGGTTGTT TTGATGGCCA TGGTTGCATC CGTGGCATTT TGTAGCTCGG CGACACAACA TACGGTGGGC GACGCTTTTG GCTGGGTTAT TCCTAGCAAC  CCAAATCTCT ATACTGACTG GGTATCTCAA AGGATGTTCA TTGTTGGTGA CACTCTAGTC TTTGACTTTC CCACCGGAAC ACATGATGTA ACAGAAGTGT CTAAGGATGA CTACGATCAT  TGTCACGTTG GTAACCCAAC ATCCATCATA AAAACCGGCC CTGCAACCAT CAACTTGACC AGCCCTGGAG ATCACTATTA CATCTGTTCA TTGGAGGGAC ATTGCATGTT TCATCAGAAA 
TTAGCAATTA ATGTTGTAAT GAATTCTTCA CTTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATGCTT TCAATTTTAA TATGGTTGTT TTGATGGCCA TGGTTGCATC CGTGGCATTT TGTAGCTCGG CGACACAACA TACGGTGGGC GACGCTTTTG GCTGGGTTAT TCCTAGCAAC  CCAAATCTCT ATACTGACTG GGTATCTCAA AGGATGTTCA TTGTTGGTGA CACTCTAGTC TTTGACTTTC CCACCGGAAC ACATGATGTA ACAGAAGTGT CTAAGGATGA CTACGATCAT  TGTCACGTTG GTAACCCAAC ATCCATCATA AAAACCGGCC CTGCAACCAT CAACTTGACC AGCCCTGGAG ATCACTATTA CATCTGTTCA TTGGAGGGAC ATTGCATGTT TCATCAGAAA 
TTAGCAATTA ATGTTGTAAT GAATTCTTCA CTTTAA 

Retrieve as FASTA