Entry information : HaSTC29HanXRQChr13g0417191
Entry ID 14604
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC29HanXRQChr13g0417191
Name HaSTC29HanXRQChr13g0417191
Class Stellacyanin    [Orthogroup: STC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC29
start..stop
S start..stop
HaSTC09 214 8e-72 1..193 1..156
HaSTC08 209 5e-70 1..193 1..155
HaSTC07 209 6e-70 1..193 1..155
HaSTC06 199 3e-66 1..198 1..151
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 163490404..163491012 609  
join(163490404..163491012)


exon

Literature and cross-references HaSTC29HanXRQChr13g0417191
DNA ref. HanXRQ genome:   HanXRQChr13 (163490404..163491012)
Protein sequence: HaSTC29HanXRQChr13g0417191
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   202 (178)
PWM (Da):   %s   22062.43 (19651.1) Transmb domain:   %s   i7-29o56-75i80-99o179-201i
PI (pH):   %s   9.04 (9.04) Peptide Signal:   %s   cut: 25 range:25-202
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSHSTIVF ILVTLGVLAT LVSATEYTVG DENGWTLDFD YQTWAKDKVF VVGDKLGMLY MYNSFYIVFL FLILGSRTML ISYKPFFFIL DVVFNYALGT HNVVKVNGTG FQQCLTSSTN 
GTLTSGRDVI TLQTQGRKWY ICGVAKHCKL RNMKLVITVL PQTMSPAPTP ALSQYASSAL AAPTSYGFVV ALLFGGLMSL LI 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCAT CTCATTCAAC TATTGTCTTC ATTCTTGTAA CACTTGGTGT TCTTGCAACA TTAGTTTCCG CAACAGAATA CACCGTCGGG GATGAAAATG GTTGGACTCT CGACTTTGAT  TATCAAACAT GGGCCAAGGA TAAAGTTTTC GTTGTCGGAG ATAAACTTGG TATGTTATAT ATGTATAACT CGTTTTATAT TGTTTTCTTG TTTTTGATTC TTGGTTCTAG GACCATGCTT  ATAAGTTATA AACCGTTTTT TTTCATCCTT GATGTAGTAT TCAATTACGC GCTTGGCACT CACAATGTGG TGAAAGTCAA CGGCACTGGT TTCCAACAAT GTTTGACTTC ATCTACCAAT  GGAACGTTGA CAAGTGGACG AGACGTCATC ACCCTTCAAA CTCAAGGAAG GAAATGGTAC ATTTGTGGTG TCGCGAAGCA CTGTAAGTTG AGAAACATGA AGCTTGTGAT CACGGTTCTT  CCACAAACGA TGAGTCCGGC TCCAACTCCG GCTCTAAGCC AATATGCATC GTCCGCATTG GCGGCACCAA CAAGTTATGG GTTTGTAGTT GCGTTGTTGT TCGGAGGTCT TATGTCACTC 
TTAATTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCAT CTCATTCAAC TATTGTCTTC ATTCTTGTAA CACTTGGTGT TCTTGCAACA TTAGTTTCCG CAACAGAATA CACCGTCGGG GATGAAAATG GTTGGACTCT CGACTTTGAT  TATCAAACAT GGGCCAAGGA TAAAGTTTTC GTTGTCGGAG ATAAACTTGG TATGTTATAT ATGTATAACT CGTTTTATAT TGTTTTCTTG TTTTTGATTC TTGGTTCTAG GACCATGCTT  ATAAGTTATA AACCGTTTTT TTTCATCCTT GATGTAGTAT TCAATTACGC GCTTGGCACT CACAATGTGG TGAAAGTCAA CGGCACTGGT TTCCAACAAT GTTTGACTTC ATCTACCAAT  GGAACGTTGA CAAGTGGACG AGACGTCATC ACCCTTCAAA CTCAAGGAAG GAAATGGTAC ATTTGTGGTG TCGCGAAGCA CTGTAAGTTG AGAAACATGA AGCTTGTGAT CACGGTTCTT  CCACAAACGA TGAGTCCGGC TCCAACTCCG GCTCTAAGCC AATATGCATC GTCCGCATTG GCGGCACCAA CAAGTTATGG GTTTGTAGTT GCGTTGTTGT TCGGAGGTCT TATGTCACTC 
TTAATTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCAT CTCATTCAAC TATTGTCTTC ATTCTTGTAA CACTTGGTGT TCTTGCAACA TTAGTTTCCG CAACAGAATA CACCGTCGGG GATGAAAATG GTTGGACTCT CGACTTTGAT  TATCAAACAT GGGCCAAGGA TAAAGTTTTC GTTGTCGGAG ATAAACTTGG TATGTTATAT ATGTATAACT CGTTTTATAT TGTTTTCTTG TTTTTGATTC TTGGTTCTAG GACCATGCTT  ATAAGTTATA AACCGTTTTT TTTCATCCTT GATGTAGTAT TCAATTACGC GCTTGGCACT CACAATGTGG TGAAAGTCAA CGGCACTGGT TTCCAACAAT GTTTGACTTC ATCTACCAAT  GGAACGTTGA CAAGTGGACG AGACGTCATC ACCCTTCAAA CTCAAGGAAG GAAATGGTAC ATTTGTGGTG TCGCGAAGCA CTGTAAGTTG AGAAACATGA AGCTTGTGAT CACGGTTCTT  CCACAAACGA TGAGTCCGGC TCCAACTCCG GCTCTAAGCC AATATGCATC GTCCGCATTG GCGGCACCAA CAAGTTATGG GTTTGTAGTT GCGTTGTTGT TCGGAGGTCT TATGTCACTC 
TTAATTTAA 

Retrieve as FASTA