Entry information : HaSTC35HanXRQChr17g0561451
Entry ID 14610
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC35HanXRQChr17g0561451
Name HaSTC35HanXRQChr17g0561451
Class Stellacyanin    [Orthogroup: STC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC35
start..stop
S start..stop
HaSTC34 536 0 1..263 1..263
HaSTC32 533 0 1..263 1..263
HaSTC31 530 0 1..263 1..263
HaSTC33 465 8e-169 1..263 1..261
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 159008185..159008353 169 N° 2 159008456..159008815 360 N° 3 159008907..159009169 263  
join(159008185..159008353,159008456..159008815,159008907..159009169)


exon

Literature and cross-references HaSTC35HanXRQChr17g0561451
DNA ref. HanXRQ genome:   HanXRQChr17 (159008185..159009169)
Protein sequence: HaSTC35HanXRQChr17g0561451
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   263 (239)
PWM (Da):   %s   29063.01 (26688.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.55 (9.45) Peptide Signal:   %s   cut: 25 range:25-263
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATNKWGVIFVAATIAALATSVSAKLFTVGDEKGWTLNFDYQAWAKDKVFVVGDQLVFKYATGKHNVFRVNGTVFQQCIIPPTNEALTSGYDVITLATPGRKWYICGVGKHCEYGLKLFINVLPQSYPSPPPPPPPLVYPAPSGKVFVVGDDKGWTLNFDYQAWAMGKKFYVGDKLVFRYPKGIHNVFRVDGTSFQQCIIPAAYEALTSGYDVITLQTPGRKWYICGVGKHCQMGLKLFINVLPYPTYVPPPYHGTRKLAPPS

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACTAACAAGTGGGGCGTCATCTTTGTCGCAGCAACAATAGCAGCTTTAGCTACTTCAGTTTCGGCCAAGTTGTTTACTGTTGGTGACGAGAAAGGATGGACACTCAACTTCGAT
TATCAAGCTTGGGCCAAAGACAAGGTATTCGTTGTTGGAGATCAACTCG
GTATGTGTCCTTTTACAATATGAGCATTATGTACTTCTGTACGATGGGTACTCGTGTTAGTAGGTGTTTAT
ATAATAAATTCTGTATGCGTTATGTGTGTAGTTTTCAAATACGCTACTGGAAAACACAATGTCTTCAGAGTCAACGGAACTGTTTTCCAACAGTGCATCATTCCTCCTACAAATGAAGCT
CTTACTAGTGGATATGACGTGATAACACTAGCAACTCCAGGAAGAAAATGGTACATATGTGGAGTTGGCAAGCACTGTGAGTATGGTTTGAAGCTTTTCATCAACGTGCTTCCACAATCA
TATCCTTCACCTCCCCCTCCACCTCCTCCATTGGTTTATCCAGCTCCTTCAGGCAAAGTGTTTGTGGTTGGAGATGATAAAGGCTGGACCCTGAACTTTGATTACCAAGCTTGGGCCATG
GGAAAGAAATTCTATGTCGGAGATAAGCTTG
GTTCGTATTCATACTTATACGCCATCCAATATTTGTGTGAATCGAATGTTTTGATGCAGATTGCTAACTGGTTACAACTTTATTGTCAC
AGTTTTCAGGTACCCAAAGGGAATACATAATGTATTTAGAGTAGATGGAACTTCATTCCAGCAATGTATCATTCCTGCTGCTTATGAAGCCCTCACCAGTGGATACGACGTGATCACTTT
ACAAACCCCGGGGAGGAAATGGTACATTTGTGGTGTTGGAAAACACTGCCAGATGGGGTTGAAGCTTTTCATCAATGTACTTCCCTATCCAACATATGTACCGCCTCCATACCATGGAAC
AAGAAAACTCGCACCACCTAGCTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACTAACAAGTGGGGCGTCATCTTTGTCGCAGCAACAATAGCAGCTTTAGCTACTTCAGTTTCGGCCAAGTTGTTTACTGTTGGTGACGAGAAAGGATGGACACTCAACTTCGAT
TATCAAGCTTGGGCCAAAGACAAGGTATTCGTTGTTGGAGATCAACTCG
TTTTCAAATACGCTACTGGAAAACACAATGTCTTCAGAGTCAACGGAACTGTTTTCCAACAGTGCATCATT
CCTCCTACAAATGAAGCTCTTACTAGTGGATATGACGTGATAACACTAGCAACTCCAGGAAGAAAATGGTACATATGTGGAGTTGGCAAGCACTGTGAGTATGGTTTGAAGCTTTTCATC
AACGTGCTTCCACAATCATATCCTTCACCTCCCCCTCCACCTCCTCCATTGGTTTATCCAGCTCCTTCAGGCAAAGTGTTTGTGGTTGGAGATGATAAAGGCTGGACCCTGAACTTTGAT
TACCAAGCTTGGGCCATGGGAAAGAAATTCTATGTCGGAGATAAGCTTG
TTTTCAGGTACCCAAAGGGAATACATAATGTATTTAGAGTAGATGGAACTTCATTCCAGCAATGTATCATT
CCTGCTGCTTATGAAGCCCTCACCAGTGGATACGACGTGATCACTTTACAAACCCCGGGGAGGAAATGGTACATTTGTGGTGTTGGAAAACACTGCCAGATGGGGTTGAAGCTTTTCATC
AATGTACTTCCCTATCCAACATATGTACCGCCTCCATACCATGGAACAAGAAAACTCGCACCACCTAGCTAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACTA ACAAGTGGGG CGTCATCTTT GTCGCAGCAA CAATAGCAGC TTTAGCTACT TCAGTTTCGG CCAAGTTGTT TACTGTTGGT GACGAGAAAG GATGGACACT CAACTTCGAT  TATCAAGCTT GGGCCAAAGA CAAGGTATTC GTTGTTGGAG ATCAACTCGT TTTCAAATAC GCTACTGGAA AACACAATGT CTTCAGAGTC AACGGAACTG TTTTCCAACA GTGCATCATT  CCTCCTACAA ATGAAGCTCT TACTAGTGGA TATGACGTGA TAACACTAGC AACTCCAGGA AGAAAATGGT ACATATGTGG AGTTGGCAAG CACTGTGAGT ATGGTTTGAA GCTTTTCATC  AACGTGCTTC CACAATCATA TCCTTCACCT CCCCCTCCAC CTCCTCCATT GGTTTATCCA GCTCCTTCAG GCAAAGTGTT TGTGGTTGGA GATGATAAAG GCTGGACCCT GAACTTTGAT  TACCAAGCTT GGGCCATGGG AAAGAAATTC TATGTCGGAG ATAAGCTTGT TTTCAGGTAC CCAAAGGGAA TACATAATGT ATTTAGAGTA GATGGAACTT CATTCCAGCA ATGTATCATT  CCTGCTGCTT ATGAAGCCCT CACCAGTGGA TACGACGTGA TCACTTTACA AACCCCGGGG AGGAAATGGT ACATTTGTGG TGTTGGAAAA CACTGCCAGA TGGGGTTGAA GCTTTTCATC 
AATGTACTTC CCTATCCAAC ATATGTACCG CCTCCATACC ATGGAACAAG AAAACTCGCA CCACCTAGCT AA 

Retrieve as FASTA