Entry information : LsaPrx20
Entry ID 1463
Creation 2006-08-18 (Christophe Dunand)
Last sequence changes 2006-08-18 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2006-08-18
Peroxidase information: LsaPrx20
Name LsaPrx20
Class Class III peroxidase     [Orthogroup: Prx014]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx20
start..stop
S start..stop
PtPrx24 393 9e-139 14..296 11..295
VvPrx45 393 2e-138 11..296 16..304
VvPrx44 390 1e-137 11..296 16..304
PtPrx23 389 3e-137 14..296 11..295
Literature and cross-references LsaPrx20
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K.
Lettuce and Sunflower ESTs from the Compositae Genome Project
Unpublished (2002)

Cluster/Prediction ref. UniGene:   Lsa.11405
Protein sequence: LsaPrx20
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   296 (268)
PWM (Da):   %s   32001.86 (28821.2)  
PI (pH):   %s   6.5 (5.68) Peptide Signal:   %s   cut: 29 range:29-296
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDPHHSLRTI YPYIIILILS LNSMGCKAQL SPTFYDSTCP NALTVIRTSV RTAVSRQRRM AALLIRLHFH DCFVQGCDAS ILLNDTPTTE RTTFSNVGVG GYEVIDAAKS AVENICPGIV  SCADILAVAA RDASVSVGGP SWSVGLGRRD STAAYPSQAD SDLPRADQDL QSLISDFQVK GLSERDMVAL SGAHTIGQSR CVAFRGRIHG NGSSDIDANF ATTRRRNCPL TRGEGDDNMA 
PLDLVTPNSF DNNYFRNLVQ RRSLLSSDQV LFNGGSSDSI VLEYSNSPFR FASDFA 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs. Small 3' fragment is missing. cultivar=Salinas