Entry information : MpPrx17 (Mapoly0011s0220)
Entry ID 14673
Creation 2017-12-12 (Christophe Dunand)
Last sequence changes 2017-12-12 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2017-12-14 (Christophe Dunand)
Peroxidase information: MpPrx17 (Mapoly0011s0220)
Name (synonym) MpPrx17 (Mapoly0011s0220)
Class Class III peroxidase     [Orthogroup: Prx052]*
Taxonomy Eukaryota Viridiplantae Streptophyta Marchantiaceae Marchantia
Organism Marchantia polymorpha    [TaxId: 3197 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpPrx17
start..stop
S start..stop
MpPrx148 368 6e-130 1..191 1..191
MpPrx144 367 1e-129 1..191 1..191
MpPrx111 367 2e-129 1..191 1..191
MpPrx140 367 2e-129 1..191 1..191
Literature and cross-references MpPrx17 (Mapoly0011s0220)
Protein sequence: MpPrx17 (Mapoly0011s0220)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   232 (209)
PWM (Da):   %s   24861.84 (22441.4)  
PI (pH):   %s   6.5 (6.50) Peptide Signal:   %s   cut: 24 range:24-232
Sequence
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Send to Peroxiscan
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MSPTSVRSVV LLLLAVAVVV SDAQLQLSET FYDATCPQAA SIVQQKVNAF VDADRGLAAA LMRLHFHDCF VRGCDGSVLL NSTESMLTEK EALLNKGSLR GFEQIDEIKM ELECACPGVV 
SCADILALVA RDATAKVGGT SWPVFLGRID GGASFADEVN SSLPERTDNF TQLVARFARV GLDARDMVIL SVPADQALRI HGSGRHQRHL RLRVLLGPAH EQGPAGVRRG AL* 

Retrieve as FASTA  
Remarks Exon 4 is missing due to N and scaffold border
DNA
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ATGTCTCCTA CCAGTGTGAG ATCGGTAGTC CTTCTTCTGC TCGCGGTAGC AGTAGTTGTT TCGGACGCGC AGTTACAGCT GTCGGAAACG TTCTATGATG CCACATGTCC ACAAGCCGCA  TCCATCGTCC AACAGAAGGT GAATGCATTT GTGGATGCCG ATCGAGGCCT CGCTGCAGCT TTGATGCGAC TTCATTTCCA CGATTGCTTC GTCCGGGTAC GTCAACTCGT AATGCTGAAA  GCGATGCATG CAAACGTATA CTTGTTCAAG CATAAGACTG GAAGACAACC TCAATGCTGA CCAGTAGCGC TATAACTCAT ATGCGAACTT TGTATTATTG ACGACATACA GGGTTGCGAT  GGATCCGTCC TCCTCAATTC TACCGAGTCT ATGCTGACCG AGAAAGAAGC ATTGCTCAAC AAAGGTTCTT TGAGGGGATT CGAGCAGATA GACGAAATAA AGATGGAGCT GGAGTGCGCA  TGCCCAGGTG TGGTATCTTG TGCCGATATT TTAGCATTGG TCGCCCGAGA CGCTACCGCT AAGGTACGAA TTCTGGTGAT GGACTTTGCT ACGAATCTAG CATCACTCAT AAAATAGCAT  ATTATATGCA AGCCATATCA CCTGATTCAA AAATGCGTGA ATGGTCTTTT GAGTGCTCGG AAAGGACAAA CTAGCAGTGG ACAGTATTCA TGGGCATATT GGCCTTTGCA GGTTGGTGGC  ACTAGCTGGC CCGTGTTTCT GGGCCGTATA GACGGAGGAG CTTCATTCGC CGATGAGGTC AACAGTAGTT TACCTGAACG TACAGACAAC TTCACGCAAC TCGTCGCCCG GTTCGCCAGA  GTTGGACTCG ATGCCAGAGA CATGGTTATC CTATCAGGTA ACTTGACGAG TGCAAAATGA TCTCTCATGT GCCGCTTCAG CTACAAAATG CTGTATTGTA GATGTAATGA AGGATTTGAA  GCCCTGAAAA TACACTCGAA GTCCAAGAGA GTAAAATATT GATGTTGCTT CCCCACTACA TTCACTCAAA TGCAGGAGGA CACTCTATTG GACAAGTTCA TTGCGGCGCA TTCTTCGAGC  GCCTCTACAA CTTCCAGGGA CTCAACATCA CTGATCCGTC CATGGACCCT GAGTTCGCTG CCATGCTCAA GGTCCAGTGC CCGCCGACCA AGCCCTTCGG ATTCATGGCT CTGGACGCCA 
CCAACGGCAC CTTCGACTCC GCGTACTACT TGGACCTGCT CACGAACAAG GGCCTGCTGG AGTCCGACGT GGCGCTCTTT GA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCTCCTA CCAGTGTGAG ATCGGTAGTC CTTCTTCTGC TCGCGGTAGC AGTAGTTGTT TCGGACGCGC AGTTACAGCT GTCGGAAACG TTCTATGATG CCACATGTCC ACAAGCCGCA  TCCATCGTCC AACAGAAGGT GAATGCATTT GTGGATGCCG ATCGAGGCCT CGCTGCAGCT TTGATGCGAC TTCATTTCCA CGATTGCTTC GTCCGGGGTT GCGATGGATC CGTCCTCCTC  AATTCTACCG AGTCTATGCT GACCGAGAAA GAAGCATTGC TCAACAAAGG TTCTTTGAGG GGATTCGAGC AGATAGACGA AATAAAGATG GAGCTGGAGT GCGCATGCCC AGGTGTGGTA  TCTTGTGCCG ATATTTTAGC ATTGGTCGCC CGAGACGCTA CCGCTAAGGT TGGTGGCACT AGCTGGCCCG TGTTTCTGGG CCGTATAGAC GGAGGAGCTT CATTCGCCGA TGAGGTCAAC  AGTAGTTTAC CTGAACGTAC AGACAACTTC ACGCAACTCG TCGCCCGGTT CGCCAGAGTT GGACTCGATG CCAGAGACAT GGTTATCCTA TCAGTGCCCG CCGACCAAGC CCTTCGGATT 
CATGGCTCTG GACGCCACCA ACGGCACCTT CGACTCCGCG TACTACTTGG ACCTGCTCAC GAACAAGGGC CTGCTGGAGT CCGACGTGGC GCTCTTTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCTCCTA CCAGTGTGAG ATCGGTAGTC CTTCTTCTGC TCGCGGTAGC AGTAGTTGTT TCGGACGCGC AGTTACAGCT GTCGGAAACG TTCTATGATG CCACATGTCC ACAAGCCGCA  TCCATCGTCC AACAGAAGGT GAATGCATTT GTGGATGCCG ATCGAGGCCT CGCTGCAGCT TTGATGCGAC TTCATTTCCA CGATTGCTTC GTCCGGGGTT GCGATGGATC CGTCCTCCTC  AATTCTACCG AGTCTATGCT GACCGAGAAA GAAGCATTGC TCAACAAAGG TTCTTTGAGG GGATTCGAGC AGATAGACGA AATAAAGATG GAGCTGGAGT GCGCATGCCC AGGTGTGGTA  TCTTGTGCCG ATATTTTAGC ATTGGTCGCC CGAGACGCTA CCGCTAAGGT TGGTGGCACT AGCTGGCCCG TGTTTCTGGG CCGTATAGAC GGAGGAGCTT CATTCGCCGA TGAGGTCAAC  AGTAGTTTAC CTGAACGTAC AGACAACTTC ACGCAACTCG TCGCCCGGTT CGCCAGAGTT GGACTCGATG CCAGAGACAT GGTTATCCTA TCAGTGCCCG CCGACCAAGC CCTTCGGATT 
CATGGCTCTG GACGCCACCA ACGGCACCTT CGACTCCGCG TACTACTTGG ACCTGCTCAC GAACAAGGGC CTGCTGGAGT CCGACGTGGC GCTCTTTGA 

Retrieve as FASTA