Entry information : HaPrx01_QIR8
Entry ID 1468
Creation 2006-08-28 (Christophe Dunand)
Last sequence changes 2012-09-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-04-27 (Christophe Dunand)
Peroxidase information: HaPrx01_QIR8
Name HaPrx01_QIR8
Class Class III peroxidase    [Orthogroup: Prx103]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue types Cotyledons
Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx01_QIR8
start..stop
S start..stop
HarPrx20 639 0 1..320 1..320
HaPrx01 637 0 1..320 1..320
ZePrx14 483 5e-174 1..316 1..317
ZePrx15 483 1e-173 1..316 1..317
Literature and cross-references HaPrx01_QIR8
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project Unpublished (2002). Genoplante
Protein ref. UniProtKB:   Q4KXC3
EST ref. GenBank:   BQ913398.1 [5' end]   CD846768.1 [3' end]
Protein sequence: HaPrx01_QIR8
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (293)
PWM (Da):   %s   33635.53 (30552.9) Transmb domain:   %s   i7-24o
PI (pH):   %s   4.52 (4.43) Peptide Signal:   %s   cut: 28 range:28-320
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGYYKSTILV TIFIILISAD YFMPCKAQLS TTFYDSTCPN ALSTIQTSIN AAVSRNGRNA ASVIRLHFHD CFVQGCDASL LLGGAGSEKE SAANDGVVGY DVIDDAKAAV ESVCPGVVSC  ADILAVAARD ASVAVGGPSW TVRLGRRDSP DSNAAEAATD LPRGNMNLGE LISNFANKGF NTREMVALSG SHTLGQARCV RFRGRIYNSP LPIDAAFNSS LTAICPPTAP TGDATLQPLD 
LVTPNTFDNN YFLNLRASRG LLISDQVLFN GDSADSIVTE YADNPTTFDS DFAAAMVKMS EIEVLTGTSG IIRTCCTSAT 

Retrieve as FASTA  
Remarks Complete sequence from 8 ESTs. cultivar="QIR8" and "RHA801"
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTATT ATAAGTCTAC TATCTTGGTC ACTATATTTA TTATACTTAT ATCAGCAGAC TACTTCATGC CATGCAAAGC TCAGTTGTCA ACCACCTTTT ATGATAGCAC ATGCCCTAAT  GCACTTTCAA CCATTCAAAC TTCAATTAAT GCTGCGGTAT CACGTAATGG TCGCAATGCA GCCTCCGTTA TTCGCCTTCA TTTTCATGAT TGTTTCGTTC AGGGTTGTGA TGCATCTCTT  TTGCTAGGAG GTGCTGGCAG TGAGAAGGAG TCAGCAGCCA ATGATGGTGT GGTGGGCTAC GATGTTATAG ATGATGCTAA AGCTGCAGTC GAGAGCGTAT GTCCTGGAGT TGTATCGTGT  GCTGATATAC TTGCAGTCGC AGCTCGTGAT GCTTCTGTCG CGGTTGGGGG GCCGTCATGG ACCGTAAGAC TTGGAAGAAG AGATTCACCA GATTCAAACG CGGCAGAAGC CGCAACTGAT  CTTCCAAGAG GGAATATGAA TTTAGGTGAA CTTATCAGCA ACTTTGCTAA TAAGGGATTT AACACGAGAG AAATGGTCGC CTTATCAGGA TCTCATACAC TCGGGCAGGC CAGATGTGTT  AGGTTTCGGG GAAGGATATA CAACAGTCCT CTACCTATCG ATGCTGCTTT TAATAGCTCC CTTACTGCAA TCTGCCCACC GACTGCACCT ACTGGCGATG CAACCTTGCA ACCACTTGAT  TTAGTGACAC CAAATACATT CGACAACAAC TACTTCCTGA ATCTTCGGGC TAGTAGGGGT CTTCTTATAT CAGACCAAGT ACTCTTTAAC GGAGACTCAG CTGATAGCAT TGTGACCGAG  TATGCTGACA ATCCTACAAC GTTTGATTCT GATTTTGCTG CGGCCATGGT TAAGATGAGT GAAATTGAAG TCCTTACAGG TACTAGTGGG ATTATAAGGA CCTGTTGCAC TAGTGCAACT 
TAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GACTTACTCT TTAAAAAACA TTAGTCGCAA ACTTTTTTTT TTCTTTTTTT TTTTCTCTTC AGTAATATGG GTTATTATAA GTCTACTATC TTGGTCACTA TATTTATTAT ACTTATATCA  GCAGACTACT TCATGCCATG CAAAGCTCAG TTGTCAACCA CCTTTTATGA TAGCACATGC CCTAATGCAC TTTCAACCAT TCAAACTTCA ATTAATGCTG CGGTATCACG TAATGGTCGC  AATGCAGCCT CCGTTATTCG CCTTCATTTT CATGATTGTT TCGTTCAGGG TTGTGATGCA TCTCTTTTGC TAGGAGGTGC TGGCAGTGAG AAGGAGTCAG CAGCCAATGA TGGTGTGGTG  GGCTACGATG TTATAGATGA TGCTAAAGCT GCAGTCGAGA GCGTATGTCC TGGAGTTGTA TCGTGTGCTG ATATACTTGC AGTCGCAGCT CGTGATGCTT CTGTCGCGGT TGGGGGGCCG  TCATGGACCG TAAGACTTGG AAGAAGAGAT TCACCAGATT CAAACGCGGC AGAAGCCGCA ACTGATCTTC CAAGAGGGAA TATGAATTTA GGTGAACTTA TCAGCAACTT TGCTAATAAG  GGATTTAACA CGAGAGAAAT GGTCGCCTTA TCAGGATCTC ATACACTCGG GCAGGCCAGA TGTGTTAGGT TTCGGGGAAG GATATACAAC AGTCCTCTAC CTATCGATGC TGCTTTTAAT  AGCTCCCTTA CTGCAATCTG CCCACCGACT GCACCTACTG GCGATGCAAC CTTGCAACCA CTTGATTTAG TGACACCAAA TACATTCGAC AACAACTACT TCCTGAATCT TCGGGCTAGT  AGGGGTCTTC TTATATCAGA CCAAGTACTC TTTAACGGAG ACTCAGCTGA TAGCATTGTG ACCGAGTATG CTGACAATCC TACAACGTTT GATTCTGATT TTGCTGCGGC CATGGTTAAG  ATGAGTGAAA TTGAAGTCCT TACAGGTACT AGTGGGATTA TAAGGACCTG TTGCACTAGT GCAACTTAAG AAACGGAGAT GTAAAGTGAT ATTATGTTAG TGTTGACGAT TTGCAGACAC 
AAACAAGTAT TCTGCATG 

Retrieve as FASTA