Entry information : LsaPrx18
Entry ID 1469
Creation 2006-08-12 (Christophe Dunand)
Last sequence changes 2006-08-12 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2006-08-12
Peroxidase information: LsaPrx18
Name LsaPrx18
Class Class III peroxidase     [Orthogroup: Prx022]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx18
start..stop
S start..stop
LvPrx18 613 0 1..304 1..304
LperPrx18 573 0 1..298 1..299
NtPrx31-1A 436 3e-155 1..304 1..304
CclPrx59 424 9e-151 17..304 20..306
Literature and cross-references LsaPrx18
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K.
Lettuce and Sunflower ESTs from the Compositae Genome Project
Unpublished (2002)

Cluster/Prediction ref. UniGene:   Lsa.9967
Protein sequence: LsaPrx18
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   304 (279)
PWM (Da):   %s   33142.4 (30351.0)  
PI (pH):   %s   5.33 (5.07) Peptide Signal:   %s   cut: 26 range:26-304
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNQPCALKCS LILMFSLIFQ PLVNSQLDYK FYDSTCPNLT KIVKFNLWSA MNNDSRIAAS LLRLHFHDCI SNGCEGSVLL DATNSFQSEK DANPDRNSAR GFELIESIKA NVEKACPGTV  SCTDILTLAV REAVFLSGGP YYSLPMGRRD GITANITLAN TDIPSPFEPL DNITSKFTTK GLNLKDMVVL SGAHTIGFAQ CFTFKQRLFN FDGSGGPDPL LDASLASSLQ TVCPNQDDSN 
TNLVPLDAVT TTKFDNVYYR NLVNNSGILG SDQALMTDNR TSGMVLKYSK FPYLFAKDFG ASMV 

Retrieve as FASTA  
Remarks Partial sequence from 7 ESTs + Singleton (BQ853644, intron mis-splicing?). Short 3'end is missing.