Entry information : HaGrxC07-1B
Entry ID 14770
Creation 2017-11-23 (Catherine Mathe (Scipio))
Last sequence changes 2018-01-04 (Catherine Mathe (Scipio))
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaGrxC07-1B
Name HaGrxC07-1B
Class CGYC Grx    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaGrxC07-1B
start..stop
S start..stop
HaGrxC18 73 7e-20 1..42 1..42
HaGrxC05 73 7e-20 1..42 1..42
HaGrxC14 73 8e-20 1..42 1..42
HaGrxC07-1C 73 8e-20 1..42 1..42
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 125467780..125467905 126  
join(125467780..125467905)


exon

Literature and cross-references HaGrxC07-1B
DNA ref. HanXRQ genome:   HanXRQChr11 (125467780..125467905)
Protein sequence: HaGrxC07-1B
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   42 (18)
PWM (Da):   %s   4454.34 (1832.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.55 (9.54) Peptide Signal:   %s   cut: 25 range:25-42
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSTSSSIFIL FFTIATLFTS NIEASSVDFV KKIVSSHSIV TF 

Retrieve as FASTA  
Remarks Warnings: Equal sequence : 14409;14411;14418;14419;14426;14430 Incomplte: mismatches,gap to queryend,
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCACCA GTTCTTCCAT TTTCATCCTC TTCTTCACCA TTGCCACCCT CTTCACATCC AATATCGAAG CATCATCCGT CGATTTCGTC AAGAAAATAG TCTCTTCTCA CTCCATAGTC 
ACCTTC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCACCA GTTCTTCCAT TTTCATCCTC TTCTTCACCA TTGCCACCCT CTTCACATCC AATATCGAAG CATCATCCGT CGATTTCGTC AAGAAAATAG TCTCTTCTCA CTCCATAGTC 
ACCTTC 

Retrieve as FASTA