Entry information : HaPrx09_ANN1312
Entry ID 1479
Creation 2007-09-06 (Christophe Dunand)
Last sequence changes 2010-05-28 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2010-05-28 (Christophe Dunand)
Peroxidase information: HaPrx09_ANN1312
Name HaPrx09_ANN1312
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx09_ANN1312
start..stop
S start..stop
HaPrx09 622 0 1..307 1..307
LsePrx19 532 0 1..307 2..306
HarPrx18 486 1e-176 18..256 1..239
LsaPrx19 487 4e-176 3..283 1..279
Literature and cross-references HaPrx09_ANN1312
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project Unpublished (2002).
EST ref. GenBank:   DY916894.1 [5' end]
Cluster/Prediction ref. UniGene:   Han.3229
Protein sequence: HaPrx09_ANN1312
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   307 (286)
PWM (Da):   %s   33072.86 (30763.5)  
PI (pH):   %s   6.51 (6.51) Peptide Signal:   %s   cut: 22 range:22-307
Sequence
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Send to Peroxiscan
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MEISILIVIS LSLMLIPFAK PQGGLKTGFY SSTCPKAEAI VRSTVEAHFK DDPTVAAGLL RLHFHDCFVE GCDGSILIKG KSAEITALAN LGLRGFEVID DAKTQLEALC PGVVSCADIL  ALAARDSVDL SDGPNWPVPT GRRDGRVSLA SKVSSLPSPL DSVDTQRSKF AAKGLDDKDL VTLSGAHTIG QTDCRFFRYR LYNFTTTGNS DPSLSQSALA QFQSLCPKNT DGTERVALDK 
DSPTKFDVNY FKNVRDGNGV LESDQRLWGD PTTxKIVRNY AGTFRGLLGL RFDFEVKNSM LQMSSIE 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. Short 3' end is missing. Strain="ANN1312". Unigene contains compile of two strains.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATCAAAAT GGAGATTAGT ATCCTCATTG TCATTAGTTT GAGTTTAATG TTAATCCCAT TTGCTAAACC TCAAGGGGGA TTAAAAACCG GGTTTTACTC GTCTACATGT CCCAAAGCTG  AAGCGATAGT GAGATCAACG GTTGAGGCAC ACTTCAAGGA TGATCCTACT GTTGCTGCTG GACTTCTTAG GCTTCATTTT CATGATTGCT TTGTTGAGGG CTGTGATGGG TCAATCTTGA  TCAAGGGTAA ATCTGCTGAG ATTACTGCAC TGGCTAATCT TGGATTAAGA GGATTTGAAG TCATTGATGA TGCTAAGACA CAATTAGAAG CTTTGTGCCC TGGTGTTGTT TCTTGTGCTG  ATATTCTTGC ATTGGCTGCG CGCGATTCGG TTGATTTGAG TGACGGCCCA AATTGGCCGG TACCAACGGG GAGACGAGAT GGCAGAGTAT CATTGGCTTC TAAAGTATCA AGTTTACCAT  CACCGTTAGA TTCGGTTGAC ACCCAAAGAA GCAAGTTTGC TGCTAAAGGC CTTGACGATA AAGATTTAGT GACACTATCT GGTGCACATA CAATAGGCCA AACAGATTGC AGATTCTTTC  GATACCGTCT ATACAACTTC ACAACAACAG GGAATTCAGA CCCGAGCTTG AGCCAGTCGG CTCTAGCCCA GTTCCAGAGC TTGTGTCCAA AGAACACCGA TGGCACAGAA CGAGTGGCAT  TGGATAAAGA CAGCCCAACA AAGTTTGATG TGAACTATTT CAAGAACGTA CGTGATGGAA ATGGTGTTTT GGAGTCGGAT CAGAGATTAT GGGGCGACCC GACGACTCAn AAGATTGTGA 
GAAACTATGC AGGAACATTT AGAGGGTTGT TGGGGTTACG ATTCGATTTC GAGGTTAAAA ATTCTATGCT CCAAATGAGT AGCATTGAAG T 

Retrieve as FASTA