Entry information : AhalPrx19 (Araha.70357s0001)
Entry ID 14800
Creation 2018-01-09 (Christophe Dunand)
Last sequence changes 2018-01-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-01-10 (Christophe Dunand)
Peroxidase information: AhalPrx19 (Araha.70357s0001)
Name (synonym) AhalPrx19 (Araha.70357s0001)
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis halleri    [TaxId: 81970 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AhalPrx19
start..stop
S start..stop
AlyPrx31 478 2e-173 1..233 84..316
AtPrx31 472 4e-171 1..233 84..316
CrubPrx105 457 2e-165 1..233 66..298
BstrPrx60 456 1e-164 1..233 84..316
Literature and cross-references AhalPrx19 (Araha.70357s0001)
Protein sequence: AhalPrx19 (Araha.70357s0001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   233
PWM (Da):   %s   25989.36  
PI (pH):   %s   9.67
Sequence
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Send to Peroxiscan
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RDSSINLSLP GDGFDVIVRA KTALELACPN TVSCSDIISV ATRDLLITVG GPYYDVFLGR RDSRTSKSSL LTDLLPLPST PISKIIQQFE SRGFNVQEMV ALSGAHSIGF SHCKEFVGRV 
GRNNTGYNPR FAVALKKACA NYPKDPTISV FNDIMTPNKF DNMYYQNLKK GLGLLESDHG LYSDPRTRTF VDLYAKNQDL FFKDFARAMQ KLSLYGIKTG RRGEIRRRCD AIN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic (no intron). 5'end is missing due to scaffold border.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGTGACTCCT CCATCAACCT CTCACTCCCC GGAGATGGCT TCGACGTCAT TGTCCGAGCC AAAACAGCTC TCGAACTCGC TTGTCCCAAC ACAGTTTCTT GTTCCGACAT AATCTCTGTC  GCAACACGTG ATCTTTTGAT CACCGTCGGT GGTCCTTACT ACGACGTTTT CCTCGGCCGT CGTGATTCAA GAACATCTAA ATCTTCTCTT TTAACCGATC TTCTTCCTCT TCCTTCTACA  CCAATCTCTA AAATCATTCA ACAGTTTGAA TCAAGAGGTT TCAATGTTCA AGAAATGGTT GCTCTTAGTG GAGCACATTC TATAGGGTTT TCACATTGTA AAGAGTTTGT GGGTCGGGTG  GGTCGGAATA ATACCGGGTA TAACCCGAGA TTCGCTGTTG CTTTGAAGAA AGCTTGTGCT AATTACCCTA AAGATCCGAC TATTTCTGTT TTTAATGATA TTATGACTCC TAATAAGTTT  GATAATATGT ATTATCAGAA TCTTAAAAAG GGTCTTGGGT TACTTGAATC GGATCATGGG TTATATTCTG ACCCGAGAAC CCGAACTTTT GTTGATCTTT ATGCTAAGAA TCAAGATCTG 
TTTTTCAAAG ATTTTGCTAG AGCTATGCAG AAGTTGAGTC TTTATGGTAT AAAGACTGGT AGAAGAGGAG AGATCCGAAG AAGGTGTGAT GCTATTAATT GA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGTGACTCCT CCATCAACCT CTCACTCCCC GGAGATGGCT TCGACGTCAT TGTCCGAGCC AAAACAGCTC TCGAACTCGC TTGTCCCAAC ACAGTTTCTT GTTCCGACAT AATCTCTGTC  GCAACACGTG ATCTTTTGAT CACCGTCGGT GGTCCTTACT ACGACGTTTT CCTCGGCCGT CGTGATTCAA GAACATCTAA ATCTTCTCTT TTAACCGATC TTCTTCCTCT TCCTTCTACA  CCAATCTCTA AAATCATTCA ACAGTTTGAA TCAAGAGGTT TCAATGTTCA AGAAATGGTT GCTCTTAGTG GAGCACATTC TATAGGGTTT TCACATTGTA AAGAGTTTGT GGGTCGGGTG  GGTCGGAATA ATACCGGGTA TAACCCGAGA TTCGCTGTTG CTTTGAAGAA AGCTTGTGCT AATTACCCTA AAGATCCGAC TATTTCTGTT TTTAATGATA TTATGACTCC TAATAAGTTT  GATAATATGT ATTATCAGAA TCTTAAAAAG GGTCTTGGGT TACTTGAATC GGATCATGGG TTATATTCTG ACCCGAGAAC CCGAACTTTT GTTGATCTTT ATGCTAAGAA TCAAGATCTG 
TTTTTCAAAG ATTTTGCTAG AGCTATGCAG AAGTTGAGTC TTTATGGTAT AAAGACTGGT AGAAGAGGAG AGATCCGAAG AAGGTGTGAT GCTATTAATT GA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGTGACTCCT CCATCAACCT CTCACTCCCC GGAGATGGCT TCGACGTCAT TGTCCGAGCC AAAACAGCTC TCGAACTCGC TTGTCCCAAC ACAGTTTCTT GTTCCGACAT AATCTCTGTC  GCAACACGTG ATCTTTTGAT CACCGTCGGT GGTCCTTACT ACGACGTTTT CCTCGGCCGT CGTGATTCAA GAACATCTAA ATCTTCTCTT TTAACCGATC TTCTTCCTCT TCCTTCTACA  CCAATCTCTA AAATCATTCA ACAGTTTGAA TCAAGAGGTT TCAATGTTCA AGAAATGGTT GCTCTTAGTG GAGCACATTC TATAGGGTTT TCACATTGTA AAGAGTTTGT GGGTCGGGTG  GGTCGGAATA ATACCGGGTA TAACCCGAGA TTCGCTGTTG CTTTGAAGAA AGCTTGTGCT AATTACCCTA AAGATCCGAC TATTTCTGTT TTTAATGATA TTATGACTCC TAATAAGTTT  GATAATATGT ATTATCAGAA TCTTAAAAAG GGTCTTGGGT TACTTGAATC GGATCATGGG TTATATTCTG ACCCGAGAAC CCGAACTTTT GTTGATCTTT ATGCTAAGAA TCAAGATCTG 
TTTTTCAAAG ATTTTGCTAG AGCTATGCAG AAGTTGAGTC TTTATGGTAT AAAGACTGGT AGAAGAGGAG AGATCCGAAG AAGGTGTGAT GCTATTAATT GA 

Retrieve as FASTA